Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 RNU6-764P-201ENST00000516396 105 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 AC136932.1-201ENST00000574771 208 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 AC113195.1-201ENST00000579952 141 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 AC037487.3-201ENST00000606668 112 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-392P-201ENST00000364926 101 ntBASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 RPS4XP11-201ENST00000446897 772 ntBASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 RNU7-116P-201ENST00000516940 62 ntBASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 AC011604.1-201ENST00000545978 196 ntBASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 AC004832.4-201ENST00000608952 331 ntBASIC1.63□□□□□ -2.15
KDM3AQ9Y4C1 AL391987.6-201ENST00000305671 199 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 SNORD81.1-201ENST00000363064 77 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 SNORD1A-201ENST00000364968 72 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 SNORD115-46-201ENST00000390982 71 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 MTND4LP30-201ENST00000454092 297 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 PRR13P7-201ENST00000605538 430 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 AC068647.2-201ENST00000637380 353 ntBASIC1.62□□□□□ -2.15
KDM3AQ9Y4C1 U8.1-201ENST00000362843 134 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-770P-201ENST00000363929 105 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.276-201ENST00000364732 109 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.368-201ENST00000365547 113 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-1011P-201ENST00000384668 107 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 MIR660-201ENST00000385235 97 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-985P-201ENST00000410182 104 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 AC245517.4-201ENST00000448601 281 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 HMGN1P10-201ENST00000474557 553 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 RNA5SP445-201ENST00000515889 115 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 MIR3145-201ENST00000580727 82 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 AC006504.6-201ENST00000590142 199 ntBASIC1.61□□□□□ -2.15
KDM3AQ9Y4C1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 SNORA25.9-201ENST00000365087 128 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 SNORA72-201ENST00000384339 132 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.569-201ENST00000384749 103 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 SNORA53-201ENST00000391141 249 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 RNA5SP168-201ENST00000516642 112 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 SNORD68-201ENST00000363214 84 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.286-201ENST00000364813 102 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-514P-201ENST00000384208 107 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 OR9P1P-201ENST00000496431 281 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU7-12P-201ENST00000516030 62 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-496P-201ENST00000516145 99 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 AP003072.1-201ENST00000531740 145 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 POLR3GP1-201ENST00000594073 261 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 AL121890.5-201ENST00000620848 304 ntBASIC1.59□□□□□ -2.16
KDM3AQ9Y4C1 RNU4-80P-201ENST00000363200 141 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.310-201ENST00000365063 113 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 RNU6-424P-201ENST00000384367 105 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 CALM2P4-201ENST00000430810 426 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 SNRPGP13-201ENST00000442212 177 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 MRPS35P2-201ENST00000508242 191 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
KDM3AQ9Y4C1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 RNU4-41P-201ENST00000364426 143 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 Y_RNA.581-201ENST00000391017 97 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 U8.16-201ENST00000391279 133 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 AL590004.1-201ENST00000405321 300 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 MIR4778-201ENST00000577635 80 ntBASIC1.57□□□□□ -2.16
KDM3AQ9Y4C1 AL512605.2-201ENST00000592972 256 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms