Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
PKP3Q9Y446 RN7SL429P-201ENST00000479090 223 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RN7SL489P-201ENST00000486185 223 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RN7SL327P-201ENST00000488659 223 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RNA5SP437-201ENST00000517249 129 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 AP002004.2-201ENST00000531656 154 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 MIR5692C2-201ENST00000577959 77 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 MIR4282-201ENST00000583613 67 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 AC005357.1-201ENST00000588399 301 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
PKP3Q9Y446 RN7SL853P-201ENST00000617250 223 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 AC073349.3-201ENST00000617616 186 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.88□□□□□ -2.11
PKP3Q9Y446 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
PKP3Q9Y446 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNU6-379P-201ENST00000363813 104 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNU6-338P-201ENST00000383888 105 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 SNORA36B-201ENST00000410438 131 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNA5SP481-201ENST00000516814 122 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 SNORA31.17-201ENST00000516953 127 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 RNU6-111P-201ENST00000517179 105 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 AL358944.1-201ENST00000528537 144 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
PKP3Q9Y446 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.87□□□□□ -2.11
PKP3Q9Y446 AL442067.1-201ENST00000613261 223 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
PKP3Q9Y446 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PKP3Q9Y446 SNORA1B-201ENST00000362535 133 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 Y_RNA.76-201ENST00000362931 109 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 Y_RNA.269-201ENST00000364685 89 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 Y_RNA.293-201ENST00000364908 93 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 SNORD58.1-201ENST00000391313 66 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 AC009310.1-201ENST00000414414 451 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.86□□□□□ -2.11
PKP3Q9Y446 Y_RNA.638-201ENST00000459374 113 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 UBL5P3-201ENST00000475112 231 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 RNU4-71P-201ENST00000516258 113 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 MIR8054-201ENST00000620877 86 ntBASIC1.86□□□□□ -2.11
PKP3Q9Y446 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
PKP3Q9Y446 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 SNORA4.2-201ENST00000365313 147 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RNU6-144P-201ENST00000383951 107 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RNU6-1080P-201ENST00000383982 107 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RNU6-440P-201ENST00000390882 105 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 COX6CP10-201ENST00000416832 224 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RNU6-437P-201ENST00000459408 95 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.85□□□□□ -2.11
PKP3Q9Y446 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 SNORD116-28-201ENST00000516123 91 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
PKP3Q9Y446 AL929325.1-201ENST00000603096 117 ntBASIC1.85□□□□□ -2.11
PKP3Q9Y446 Y_RNA.265-201ENST00000364677 108 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 Y_RNA.292-201ENST00000364904 97 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 Y_RNA.552-201ENST00000384665 112 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 RN7SKP200-201ENST00000410564 320 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 RNU7-34P-201ENST00000459394 64 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 AL049830.1-201ENST00000468034 425 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.84□□□□□ -2.11
PKP3Q9Y446 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.84□□□□□ -2.11
PKP3Q9Y446 SNORA31.10-201ENST00000516482 106 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 RNU6-388P-201ENST00000517012 105 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 RNU6-389P-201ENST00000517048 105 ntBASIC1.84□□□□□ -2.11
PKP3Q9Y446 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PKP3Q9Y446 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.12
PKP3Q9Y446 MIR367-201ENST00000362299 68 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 Y_RNA.203-201ENST00000364106 102 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 Y_RNA.304-201ENST00000365011 112 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 Y_RNA.515-201ENST00000384535 112 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 STAG3L5P-204ENST00000443759 179 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 MIR4709-201ENST00000577272 72 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 SNORA28-201ENST00000606769 126 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 AC078938.1-201ENST00000620993 318 ntBASIC1.83□□□□□ -2.12
PKP3Q9Y446 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PKP3Q9Y446 RNY1-201ENST00000364228 113 ntBASIC1.82□□□□□ -2.12
PKP3Q9Y446 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.82□□□□□ -2.12
PKP3Q9Y446 RNU7-28P-201ENST00000516759 62 ntBASIC1.82□□□□□ -2.12
PKP3Q9Y446 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.82□□□□□ -2.12
PKP3Q9Y446 MIR4724-201ENST00000579485 89 ntBASIC1.82□□□□□ -2.12
PKP3Q9Y446 Y_RNA.802-201ENST00000614892 130 ntBASIC1.82□□□□□ -2.12
PKP3Q9Y446 AC141273.2-201ENST00000618989 130 ntBASIC1.82□□□□□ -2.12
PKP3Q9Y446 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PKP3Q9Y446 RNU6-674P-201ENST00000363831 107 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 Y_RNA.262-201ENST00000364641 102 ntBASIC1.81□□□□□ -2.12
PKP3Q9Y446 SNORA8.3-201ENST00000384679 139 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms