Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 AC018634.1-201ENST00000437554 401 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 AC090515.1-201ENST00000465295 476 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 AC092185.1-201ENST00000491371 97 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 RNU6-1018P-201ENST00000516577 106 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 AC091152.3-201ENST00000604227 325 ntBASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
COL17A1Q9UMD9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 AL353689.1-201ENST00000438895 199 ntBASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 AC117454.1-201ENST00000491120 168 ntBASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 MIR5009-201ENST00000578736 100 ntBASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL17A1Q9UMD9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 MIR302B-201ENST00000362188 73 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.437-201ENST00000384113 113 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 RNU6-198P-201ENST00000384258 104 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 SNORA67.3-201ENST00000384366 140 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 AC103975.1-201ENST00000482506 483 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 AC026436.1-201ENST00000510537 270 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 RNU6-365P-201ENST00000517113 106 ntBASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 RNU6-799P-201ENST00000363567 107 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 RNU6-904P-201ENST00000516206 101 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 MAPK10-322ENST00000641485 4530 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.93-201ENST00000363066 109 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 RNA5SP456-201ENST00000364002 114 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 RNU1-91P-201ENST00000364746 163 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 SNORA36B-201ENST00000410438 131 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 AC022254.1-201ENST00000567857 235 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.6□□□□□ -1.83
COL17A1Q9UMD9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
COL17A1Q9UMD9 AC010889.1-201ENST00000566193 2666 ntBASIC3.59□□□□□ -1.83
COL17A1Q9UMD9 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
COL17A1Q9UMD9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL17A1Q9UMD9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.59□□□□□ -1.83
COL17A1Q9UMD9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 Y_RNA.78-201ENST00000362970 110 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 RNU6-484P-201ENST00000384016 107 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 MIR889-201ENST00000401280 79 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 RNA5SP136-201ENST00000410906 107 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 snoU13.14-201ENST00000459372 104 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 AC068339.1-201ENST00000526965 141 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 MIR4666B-201ENST00000578142 81 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 SNORD11B-201ENST00000607707 90 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 AC005562.2-201ENST00000618264 111 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 MIR6873-201ENST00000622788 63 ntBASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
COL17A1Q9UMD9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 Y_RNA.290-201ENST00000364879 114 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 MIR591-201ENST00000385290 95 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 RNU2-55P-201ENST00000411146 174 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 AL365496.1-201ENST00000426885 215 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 RPL31P41-201ENST00000477967 372 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 RNU6-344P-201ENST00000516635 111 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 RNU1-104P-201ENST00000517280 175 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 AC007229.1-201ENST00000590455 412 ntBASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL17A1Q9UMD9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 AC026241.1-201ENST00000517873 2142 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 SNORA63D-201ENST00000364359 132 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 Y_RNA.362-201ENST00000365518 110 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 RNU6-979P-201ENST00000383896 107 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 AL133475.1-201ENST00000404414 305 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 SNORD88.1-201ENST00000408684 91 ntBASIC3.57□□□□□ -1.84
COL17A1Q9UMD9 RNU2-49P-201ENST00000410666 184 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms