Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC117470.1-201ENST00000381974 330 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 RNU6-510P-201ENST00000391239 108 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 MTND3P8-201ENST00000412909 339 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AL390729.2-201ENST00000416137 156 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 MLLT10P1-201ENST00000418346 262 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AC092989.1-201ENST00000481235 277 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.53□□□□□ -2.32
NUP50Q9UKX7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 AC092794.2-201ENST00000620933 563 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.88-201ENST00000363029 99 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.482-201ENST00000384377 111 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 MIR522-201ENST00000385071 87 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 MTATP6P26-201ENST00000445926 662 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 AC107399.1-201ENST00000451226 265 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 RPL17P19-201ENST00000489069 552 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 SNORD45.4-201ENST00000516629 73 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.52□□□□□ -2.33
NUP50Q9UKX7 MIR6779-201ENST00000617283 64 ntBASIC0.52□□□□□ -2.33
NUP50Q9UKX7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NUP50Q9UKX7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.172-201ENST00000363765 102 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AL031003.1-201ENST00000404229 172 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 MIR548F1-201ENST00000408667 84 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AC116353.2-201ENST00000505332 712 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 MIR2355-201ENST00000517199 87 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AC036111.3-201ENST00000526389 112 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AC005899.2-201ENST00000584353 90 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.51□□□□□ -2.33
NUP50Q9UKX7 AC007742.2-201ENST00000618226 398 ntBASIC0.51□□□□□ -2.33
NUP50Q9UKX7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.101-201ENST00000363154 102 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 RNU6-99P-201ENST00000364721 107 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 MIR2053-201ENST00000459295 91 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 AC011352.1-201ENST00000512300 793 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 AC005730.3-201ENST00000583067 366 ntBASIC0.5□□□□□ -2.33
NUP50Q9UKX7 RNA5SP48-201ENST00000363969 126 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 RNU6-926P-201ENST00000384075 107 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 MIR15B-201ENST00000385045 98 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 SNORA75.4-201ENST00000391278 119 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 MIR1277-201ENST00000408536 78 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 RNU2-61P-201ENST00000411069 191 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 SNORD123-201ENST00000459473 70 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 RNU6-718P-201ENST00000516166 105 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 RNU7-43P-201ENST00000516554 64 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 AC240442.1-201ENST00000616055 283 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 PISRT1.1-201ENST00000616930 107 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 AC087588.2-201ENST00000617667 426 ntBASIC0.49□□□□□ -2.33
NUP50Q9UKX7 SNORD114-23-201ENST00000363536 72 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.318-201ENST00000365131 97 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 RNU2-54P-201ENST00000410299 190 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 RNU6-994P-201ENST00000410507 111 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 MTND4P28-201ENST00000426217 387 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP50Q9UKX7 RNU6-307P-201ENST00000516743 106 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 RNU6-1213P-201ENST00000517075 94 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 AF235103.2-201ENST00000525753 346 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 AC060780.3-201ENST00000589464 80 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 AC006380.1-201ENST00000603598 186 ntBASIC0.48□□□□□ -2.33
NUP50Q9UKX7 RNU6-654P-201ENST00000364373 107 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 SNORD50B-201ENST00000364995 70 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 RNU6-945P-201ENST00000383947 107 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 RNU6-1215P-201ENST00000384441 102 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 SNORD111-201ENST00000408139 94 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 MIR1302-7-201ENST00000408841 72 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 Y_RNA.592-201ENST00000410274 109 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 RNU6-1199P-201ENST00000411249 104 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 RNU6-1304P-201ENST00000411374 106 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 MRPS18CP6-201ENST00000423587 223 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC105313.1-201ENST00000509121 353 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC022616.4-201ENST00000522985 181 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC011195.1-201ENST00000578177 177 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AL512605.2-201ENST00000592972 256 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC002553.4-201ENST00000616896 331 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.47□□□□□ -2.33
NUP50Q9UKX7 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
NUP50Q9UKX7 AC134026.1-201ENST00000623249 2239 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 SNORD116-4-201ENST00000384733 96 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 AL392103.1-201ENST00000447000 198 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 CHEK2P4-201ENST00000450340 246 ntBASIC0.46□□□□□ -2.34
NUP50Q9UKX7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms