Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC011921.3-201ENST00000605540 361 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 AL078604.3-201ENST00000615580 211 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 U8.7-201ENST00000364940 136 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SIX4Q9UIU6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SIX4Q9UIU6 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 SNORD13-201ENST00000459299 104 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 RPS26P45-201ENST00000471748 340 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 AC117454.1-201ENST00000491120 168 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 RNU4-71P-201ENST00000516258 113 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 RNU1-142P-201ENST00000516682 145 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 AL442067.1-201ENST00000613261 223 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
SIX4Q9UIU6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SIX4Q9UIU6 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 RNY1-201ENST00000364228 113 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.257-201ENST00000364596 102 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.552-201ENST00000384665 112 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 MIR515-2-201ENST00000384883 83 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 MIR515-1-201ENST00000384884 83 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AL158823.1-201ENST00000418441 478 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC245047.4-201ENST00000433189 144 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AL606517.2-201ENST00000442855 241 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 RPS4XP11-201ENST00000446897 772 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.638-201ENST00000459374 113 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC091021.1-201ENST00000468051 388 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 RPL36AP21-201ENST00000490372 323 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC024405.2-202ENST00000532731 184 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC009779.6-201ENST00000603972 165 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC005972.2-201ENST00000604690 348 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC069114.2-201ENST00000604699 304 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC013791.1-201ENST00000616619 62 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 MIR548AY-201ENST00000617669 107 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 AC141273.2-201ENST00000618989 130 ntBASIC1.78□□□□□ -2.12
SIX4Q9UIU6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
SIX4Q9UIU6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SIX4Q9UIU6 RNU4-13P-201ENST00000364019 141 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 RNU7-115P-201ENST00000516433 55 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC024995.1-201ENST00000523014 93 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC130289.1-201ENST00000577321 73 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 MIR3124-201ENST00000582636 67 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC073349.3-201ENST00000617616 186 ntBASIC1.77□□□□□ -2.13
SIX4Q9UIU6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SIX4Q9UIU6 AC018630.2-201ENST00000534866 2403 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RNU6-899P-201ENST00000363947 107 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RNY4P28-201ENST00000365281 93 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RNU6-1323P-201ENST00000384025 107 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 AC108059.2-201ENST00000434626 151 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MTND2P29-201ENST00000438595 412 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 AC127455.1-201ENST00000565496 145 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MIR5692C2-201ENST00000577959 77 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 AC091178.2-201ENST00000584401 117 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 POLR3GP1-201ENST00000594073 261 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 AC022217.4-201ENST00000604389 163 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 AP003357.1-201ENST00000604497 148 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MIR6079-201ENST00000635807 62 ntBASIC1.76□□□□□ -2.13
SIX4Q9UIU6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SIX4Q9UIU6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.76□□□□□ -2.13
SIX4Q9UIU6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SIX4Q9UIU6 RNU4-10P-201ENST00000364383 140 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.274-201ENST00000364714 101 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 RNA5SP109-201ENST00000391010 116 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 MIR1298-201ENST00000408783 112 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 RNU6-847P-201ENST00000411115 108 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.75□□□□□ -2.13
SIX4Q9UIU6 SUB1P4-201ENST00000566062 339 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 MIR4769-201ENST00000584126 77 ntBASIC1.75□□□□□ -2.13
SIX4Q9UIU6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
SIX4Q9UIU6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SIX4Q9UIU6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.200-201ENST00000364018 102 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 SNORA72-201ENST00000384339 132 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 SNORA36B-201ENST00000410438 131 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RPL23AP54-201ENST00000495129 419 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RNU6-138P-201ENST00000515952 107 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RNY3P16-201ENST00000516338 101 ntBASIC1.74□□□□□ -2.13
SIX4Q9UIU6 RNU6-794P-201ENST00000517261 64 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms