Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.24-201ENST00000362508 103 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 RNU6-674P-201ENST00000363831 107 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 snoU2_19.4-201ENST00000364329 80 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 MIR616-201ENST00000385293 97 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 MIR1253-201ENST00000408273 105 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 RNA5SP511-201ENST00000410487 115 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 AC010409.1-201ENST00000487382 476 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 RNU7-172P-201ENST00000517125 64 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 MIR4744-201ENST00000581563 82 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 AL391903.3-201ENST00000612158 163 ntBASIC2.28□□□□□ -2.04
DKK3Q9UBP4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-275P-201ENST00000364910 107 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-969P-201ENST00000383900 105 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.508-201ENST00000384502 114 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-160P-201ENST00000384591 107 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 MIR1262-201ENST00000408276 93 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.27□□□□□ -2.05
DKK3Q9UBP4 HMGN2P34-201ENST00000437647 269 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 AC245102.2-201ENST00000448956 180 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-1053P-201ENST00000515930 101 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 RNU6-63P-201ENST00000516690 95 ntBASIC2.27□□□□□ -2.05
DKK3Q9UBP4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 RNU4-10P-201ENST00000364383 140 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 SNORD114-6-201ENST00000364393 72 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 RNY1P5-201ENST00000383890 115 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 SNORA72-201ENST00000384339 132 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 RNU6-578P-201ENST00000390980 103 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 EBAG9P1-201ENST00000418955 543 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
DKK3Q9UBP4 MTND2P29-201ENST00000438595 412 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.26□□□□□ -2.05
DKK3Q9UBP4 AC091021.1-201ENST00000468051 388 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 MIR3144-201ENST00000579460 79 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 MIR4448-201ENST00000584360 86 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 MIR338-201ENST00000636369 67 ntBASIC2.26□□□□□ -2.05
DKK3Q9UBP4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DKK3Q9UBP4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
DKK3Q9UBP4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 MIR367-201ENST00000362299 68 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 RNU4-13P-201ENST00000364019 141 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 RNU11-5P-201ENST00000391216 129 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 RNU6-437P-201ENST00000459408 95 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 SCARNA8-201ENST00000515924 131 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 RNU7-99P-201ENST00000516271 62 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 AC021753.1-201ENST00000635724 168 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
DKK3Q9UBP4 AC092881.1-201ENST00000638218 2733 ntBASIC2.25□□□□□ -2.05
DKK3Q9UBP4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNA5SP276-201ENST00000362580 94 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.170-201ENST00000363746 110 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.229-201ENST00000364347 113 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNY3P5-201ENST00000384127 102 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.572-201ENST00000384757 98 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNA5SP496-201ENST00000391240 109 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 AL117342.1-201ENST00000404861 406 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 MIR1278-201ENST00000408753 81 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNU5E-9P-201ENST00000411164 104 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNU4-61P-201ENST00000411243 107 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 HMGN2P23-201ENST00000456759 269 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 RPL23AP54-201ENST00000495129 419 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.703-201ENST00000516846 111 ntBASIC2.24□□□□□ -2.05
DKK3Q9UBP4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
DKK3Q9UBP4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
DKK3Q9UBP4 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU4-84P-201ENST00000364200 139 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.506-201ENST00000384494 102 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU6-125P-201ENST00000384505 107 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU6-417P-201ENST00000384712 107 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 MIR515-2-201ENST00000384883 83 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 MIR515-1-201ENST00000384884 83 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 SNORA48.3-201ENST00000391081 134 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RN7SKP101-201ENST00000411376 320 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RPS4XP11-201ENST00000446897 772 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU6-453P-201ENST00000516819 85 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 RNU7-128P-201ENST00000517247 62 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.23□□□□□ -2.05
DKK3Q9UBP4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.23□□□□□ -2.05
DKK3Q9UBP4 MIR4431-201ENST00000579990 94 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 AP000942.3-201ENST00000603702 160 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms