Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC106754.1-201ENST00000562632 1513 ntBASIC-0.69□□□□□ -2.52
COMMD3Q9UBI1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 RNU6-214P-201ENST00000384130 107 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 RNU6-281P-201ENST00000384212 103 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 SNORA8.3-201ENST00000384679 139 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 SNORD28-201ENST00000384706 75 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 SNORA32.3-201ENST00000384772 121 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MIR518F-201ENST00000384973 87 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MIR563-201ENST00000385080 79 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MT-TF-201ENST00000387314 71 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 SNORA75.4-201ENST00000391278 119 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 RNU2-9P-201ENST00000410194 145 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MCFD2P1-201ENST00000417812 300 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 snoU13.16-201ENST00000459350 104 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 AL357078.3-201ENST00000607528 618 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MIR8066-201ENST00000617280 78 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 MIR4788-201ENST00000639104 80 ntBASIC-0.7□□□□□ -2.52
COMMD3Q9UBI1 RNU6-324P-201ENST00000363957 106 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 SNORA24-201ENST00000384096 131 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 MIR215-201ENST00000384858 110 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC073415.1-201ENST00000449240 153 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 MTCO2P30-201ENST00000503662 364 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC026782.1-201ENST00000512952 449 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 MIR4263-201ENST00000584745 83 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC087685.1-201ENST00000587507 141 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AL355297.3-201ENST00000604082 446 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AL442067.1-201ENST00000613261 223 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AC023510.2-201ENST00000622162 746 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 AL162726.3-218ENST00000636401 95 ntBASIC-0.71□□□□□ -2.52
COMMD3Q9UBI1 RNU6-181P-201ENST00000363225 107 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 RNU6-454P-201ENST00000364292 107 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MTCYBP8-201ENST00000422855 651 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 AL031667.1-201ENST00000440222 725 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 UQCRBP2-201ENST00000447827 297 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 TPTE2P5-203ENST00000458118 728 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 RNU6-445P-201ENST00000516949 107 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 RNU7-181P-201ENST00000517234 74 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 AC006600.1-201ENST00000572529 153 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MIR4509-3-201ENST00000578671 94 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MIR4509-2-201ENST00000583920 94 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 AP001180.6-201ENST00000584918 159 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 AC006380.1-201ENST00000603598 186 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 TUSC7.1-201ENST00000610969 165 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MIR4509-1-201ENST00000618224 94 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 MIR6514-201ENST00000622549 70 ntBASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.72□□□□□ -2.52
COMMD3Q9UBI1 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 SNORD113-7-201ENST00000363762 77 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 MIR588-201ENST00000384900 83 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 RNU4-30P-201ENST00000410245 143 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 RNU6-855P-201ENST00000410395 104 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 MTND4LP11-201ENST00000422184 280 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 MIR5706-201ENST00000579841 80 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 MIR548AB-201ENST00000584917 84 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 AC092747.3-201ENST00000603769 301 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 AC018645.2-201ENST00000609151 472 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 U7.6-201ENST00000610841 64 ntBASIC-0.73□□□□□ -2.53
COMMD3Q9UBI1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 RNU6-996P-201ENST00000365438 107 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 RNU6-442P-201ENST00000383968 104 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 AL606923.1-201ENST00000406616 190 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 Z99497.1-201ENST00000421282 135 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 AL138752.1-201ENST00000452964 351 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 snoU13.2-201ENST00000459201 104 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 SNORA19.2-201ENST00000516013 114 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 SNORA31.14-201ENST00000516728 116 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 AC093023.1-201ENST00000547375 507 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 MIR3925-201ENST00000584674 77 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 AC005609.4-201ENST00000625071 447 ntBASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.74□□□□□ -2.53
COMMD3Q9UBI1 MIR30D-201ENST00000362283 70 ntBASIC-0.75□□□□□ -2.53
COMMD3Q9UBI1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.75□□□□□ -2.53
COMMD3Q9UBI1 SNORD38B-201ENST00000384690 67 ntBASIC-0.75□□□□□ -2.53
COMMD3Q9UBI1 MIR625-201ENST00000385047 85 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms