Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 Y_RNA.445-201ENST00000384168 102 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 AC010655.3-201ENST00000478818 450 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 AL357312.1-201ENST00000603879 298 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
CPSF2Q9P2I0 RNU1-17P-201ENST00000363022 152 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.813-201ENST00000364639 102 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 RNU6-21P-201ENST00000384710 107 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 PMCHL1-202ENST00000423102 261 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 AC136932.1-201ENST00000574771 208 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 AL160413.1-201ENST00000622780 310 ntBASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.27□□□□□ -2.21
CPSF2Q9P2I0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 RNU6-867P-201ENST00000364956 107 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 AC024067.1-201ENST00000426199 223 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 HMGN1P7-201ENST00000491722 313 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
CPSF2Q9P2I0 MTND4P29-201ENST00000503122 1372 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 SNORA22-201ENST00000383907 134 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.394-201ENST00000383942 103 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.424-201ENST00000384063 103 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 SNORA22C-201ENST00000384614 134 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 MIR452-201ENST00000385020 85 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.645-201ENST00000391229 102 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 U8.19-201ENST00000459095 133 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 SNORD111.1-201ENST00000516421 86 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 AL512598.1-201ENST00000610158 273 ntBASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.25□□□□□ -2.21
CPSF2Q9P2I0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 MIR764-201ENST00000390811 85 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 MLLT10P1-201ENST00000418346 262 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 RNA5SP458-201ENST00000516188 119 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 RNU6-1046P-201ENST00000516538 107 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 RNU7-116P-201ENST00000516940 62 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 AC024405.2-202ENST00000532731 184 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 MIR4769-201ENST00000584126 77 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 POLR3GP1-201ENST00000594073 261 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 AP003357.1-201ENST00000604497 148 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 BX284668.6-201ENST00000606899 438 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CPSF2Q9P2I0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 RNU6-474P-201ENST00000384243 107 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.460-201ENST00000384255 102 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 MIR1298-201ENST00000408783 112 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 SNRPGP10-201ENST00000432323 225 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 POLR2KP2-201ENST00000438155 177 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 AC127455.1-201ENST00000565496 145 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 MIR4300-201ENST00000581016 96 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 AC124312.5-201ENST00000604451 268 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 SNORD113-5-201ENST00000607261 78 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 AC090574.1-201ENST00000623186 233 ntBASIC1.23□□□□□ -2.21
CPSF2Q9P2I0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU4-80P-201ENST00000363200 141 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU6-450P-201ENST00000364654 107 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 SNORA63.7-201ENST00000365579 123 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.535-201ENST00000384612 99 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU6-131P-201ENST00000391144 107 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 LINC01399-202ENST00000458450 244 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 SEPT14P8-201ENST00000508026 178 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU6-397P-201ENST00000516226 104 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNU7-115P-201ENST00000516433 55 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms