Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC098869.1-201ENST00000481627 292 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 RNU6-764P-201ENST00000516396 105 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 AP003072.1-201ENST00000531740 145 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 AC005972.2-201ENST00000604690 348 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
HACD3Q9P035 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.34□□□□□ -2.19
HACD3Q9P035 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HACD3Q9P035 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HACD3Q9P035 Y_RNA.26-201ENST00000362539 101 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU6-770P-201ENST00000363929 105 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU6-694P-201ENST00000364071 147 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU6-806P-201ENST00000365147 105 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 Y_RNA.341-201ENST00000365341 102 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 Y_RNA.581-201ENST00000391017 97 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 CALM2P4-201ENST00000430810 426 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 POLR2KP2-201ENST00000438155 177 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 LINC01399-202ENST00000458450 244 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNA5SP168-201ENST00000516642 112 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.33□□□□□ -2.2
HACD3Q9P035 SUMO2P16-201ENST00000519475 264 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 AC011604.1-201ENST00000545978 196 ntBASIC1.33□□□□□ -2.2
HACD3Q9P035 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.33□□□□□ -2.2
HACD3Q9P035 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HACD3Q9P035 MIRLET7C-201ENST00000362160 84 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 RNU4-80P-201ENST00000363200 141 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 Y_RNA.326-201ENST00000365176 113 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 Y_RNA.418-201ENST00000384029 102 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 Y_RNA.456-201ENST00000384232 111 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 U8.16-201ENST00000391279 133 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 AC079140.2-201ENST00000506193 142 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 SNORA40.15-201ENST00000516884 107 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 AP000942.3-201ENST00000603702 160 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 SNORD3E-202ENST00000627253 216 ntBASIC1.32□□□□□ -2.2
HACD3Q9P035 Y_RNA.19-201ENST00000362462 99 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 RNU4-90P-201ENST00000362773 141 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 snoU2_19.2-201ENST00000363024 80 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 RNA5SP259-201ENST00000365541 109 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 RNU6-1323P-201ENST00000384025 107 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 MIR215-201ENST00000384858 110 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HACD3Q9P035 AC113618.1-201ENST00000416747 285 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 RPL21P38-201ENST00000418090 167 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 AC024067.1-201ENST00000426199 223 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 RNY3P15-201ENST00000516297 97 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.31□□□□□ -2.2
HACD3Q9P035 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.31□□□□□ -2.2
HACD3Q9P035 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HACD3Q9P035 Y_RNA.64-201ENST00000362845 102 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 Y_RNA.136-201ENST00000363444 102 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 SNORA72-201ENST00000384339 132 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 Y_RNA.621-201ENST00000411065 96 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.3□□□□□ -2.2
HACD3Q9P035 MRPS35P2-201ENST00000508242 191 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 MIR4769-201ENST00000584126 77 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 AC068647.2-201ENST00000637380 353 ntBASIC1.3□□□□□ -2.2
HACD3Q9P035 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.29□□□□□ -2.2
HACD3Q9P035 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 Y_RNA.152-201ENST00000363578 100 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 U8.7-201ENST00000364940 136 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 Y_RNA.541-201ENST00000384640 113 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 Y_RNA.569-201ENST00000384749 103 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
HACD3Q9P035 AP1B1P2-201ENST00000416196 106 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.29□□□□□ -2.2
HACD3Q9P035 RNU6-191P-201ENST00000516295 94 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 AC136628.3-201ENST00000521868 290 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 AL591926.4-201ENST00000616895 298 ntBASIC1.29□□□□□ -2.2
HACD3Q9P035 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HACD3Q9P035 RNU6-801P-201ENST00000364087 105 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 RNU6-290P-201ENST00000365212 101 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 Y_RNA.422-201ENST00000384054 114 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 BTF3P4-201ENST00000418852 495 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 MTCO1P5-201ENST00000433573 344 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC104332.1-201ENST00000440471 797 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC093850.1-201ENST00000454121 251 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC117454.1-201ENST00000491120 168 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 RNU7-115P-201ENST00000516433 55 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AP003733.2-201ENST00000529409 171 ntBASIC1.28□□□□□ -2.2
HACD3Q9P035 AC024405.2-202ENST00000532731 184 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms