Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC099654.14-201ENST00000638599 341 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 AL442644.1-201ENST00000454390 3105 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-392P-201ENST00000364926 101 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1175P-201ENST00000365200 107 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1283P-201ENST00000365314 105 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1040P-201ENST00000383974 107 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 SNORA72-201ENST00000384339 132 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNY4P36-201ENST00000391116 96 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 MCFD2P1-201ENST00000417812 300 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 HMGN1P7-201ENST00000491722 313 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RN7SKP164-201ENST00000516138 266 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 SNORA18.7-201ENST00000516910 131 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.718-201ENST00000517110 102 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 AC022616.4-201ENST00000522985 181 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 AC006600.1-201ENST00000572529 153 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 MIR4423-201ENST00000580922 80 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 AL359821.1-201ENST00000605519 182 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 MIR4272-201ENST00000635924 64 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
KCNIP1Q9NZI2 SNORD81.1-201ENST00000363064 77 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.387-201ENST00000383918 102 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.463-201ENST00000384271 102 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.496-201ENST00000384444 101 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR608-201ENST00000384820 100 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR628-201ENST00000385229 95 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 AC099799.1-201ENST00000439809 192 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 AC091951.2-201ENST00000500762 203 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 RN7SKP295-201ENST00000517264 153 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR4764-201ENST00000580680 88 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 MIR4769-201ENST00000584126 77 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 FAM71BP1-201ENST00000604431 523 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
KCNIP1Q9NZI2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.142-201ENST00000363491 102 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.259-201ENST00000364619 101 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AL590004.1-201ENST00000405321 300 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-855P-201ENST00000410395 104 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC108729.3-201ENST00000513484 108 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-113P-201ENST00000516653 101 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC023827.1-201ENST00000569247 97 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC131055.1-201ENST00000584626 316 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 VN1R91P-201ENST00000594377 169 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AL132765.2-201ENST00000610812 351 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC104985.2-201ENST00000620598 500 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 AC091925.1-201ENST00000623204 462 ntBASIC0.67□□□□□ -2.3
KCNIP1Q9NZI2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-131P-201ENST00000391144 107 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 MIR1302-7-201ENST00000408841 72 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 MTCO2P27-201ENST00000420740 428 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 AF228730.4-201ENST00000421457 183 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 SNORD123-201ENST00000459473 70 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 TRMT112P2-201ENST00000512910 132 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 AC133104.2-201ENST00000615272 193 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 MIR1302-1-201ENST00000637932 143 ntBASIC0.66□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1115P-201ENST00000362490 106 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 snoU2-30.1-201ENST00000365012 70 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC005042.3-201ENST00000453230 174 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 RNU7-152P-201ENST00000458982 64 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC010655.3-201ENST00000478818 450 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 MIR4298-201ENST00000584380 73 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 DEFB117-201ENST00000602356 141 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC010205.1-201ENST00000616668 449 ntBASIC0.65□□□□□ -2.31
KCNIP1Q9NZI2 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
KCNIP1Q9NZI2 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
KCNIP1Q9NZI2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.64□□□□□ -2.31
KCNIP1Q9NZI2 RNU7-43P-201ENST00000516554 64 ntBASIC0.64□□□□□ -2.31
KCNIP1Q9NZI2 Y_RNA.331-201ENST00000365267 102 ntBASIC0.63□□□□□ -2.31
KCNIP1Q9NZI2 Y_RNA.341-201ENST00000365341 102 ntBASIC0.63□□□□□ -2.31
KCNIP1Q9NZI2 Y_RNA.458-201ENST00000384240 102 ntBASIC0.63□□□□□ -2.31
KCNIP1Q9NZI2 SNORD28B-201ENST00000390993 75 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms