Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC104332.1-201ENST00000440471 797 ntBASIC1.12□□□□□ -2.23
CHCHD3Q9NX63 UBL5P1-201ENST00000507979 193 ntBASIC1.12□□□□□ -2.23
CHCHD3Q9NX63 FAM106DP-201ENST00000586416 501 ntBASIC1.12□□□□□ -2.23
CHCHD3Q9NX63 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
CHCHD3Q9NX63 AC011373.1-201ENST00000607270 237 ntBASIC1.12□□□□□ -2.23
CHCHD3Q9NX63 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.197-201ENST00000364004 102 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 snoU2-30.1-201ENST00000365012 70 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 AC117470.1-201ENST00000381974 330 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 RNU6-708P-201ENST00000384217 107 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.458-201ENST00000384240 102 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 RPS29P29-201ENST00000456396 171 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 AC114811.1-201ENST00000507207 168 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 RNU6-1170P-201ENST00000515974 106 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 MIR4498-201ENST00000577599 66 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 LARP7P1-201ENST00000605576 316 ntBASIC1.11□□□□□ -2.23
CHCHD3Q9NX63 AL391987.6-201ENST00000305671 199 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.5-201ENST00000362334 102 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.242-201ENST00000364473 110 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.341-201ENST00000365341 102 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.551-201ENST00000384661 102 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 MIR526A1-201ENST00000384897 85 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 MIR522-201ENST00000385071 87 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 MIR136-201ENST00000385207 82 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 RNU6-131P-201ENST00000391144 107 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AC048334.1-201ENST00000477975 159 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AC136932.1-201ENST00000574771 208 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 AL645939.4-201ENST00000604495 135 ntBASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.310-201ENST00000365063 113 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.338-201ENST00000365320 114 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 SNORA63.7-201ENST00000365579 123 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RNY3P14-201ENST00000384309 102 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 Y_RNA.471-201ENST00000384312 102 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RNU6-21P-201ENST00000384710 107 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 AP1B1P2-201ENST00000416196 106 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 PIGPP3-201ENST00000425307 415 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RPEP5-201ENST00000441137 268 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RPL39P28-201ENST00000465655 155 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RNU6-947P-201ENST00000516264 106 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 RNU7-110P-201ENST00000516891 62 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 AC093027.1-201ENST00000546698 429 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 AC112487.2-201ENST00000637950 304 ntBASIC1.09□□□□□ -2.23
CHCHD3Q9NX63 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CHCHD3Q9NX63 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 BTF3P4-201ENST00000418852 495 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 AC245047.8-201ENST00000456455 284 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 RNU6-1053P-201ENST00000515930 101 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 RNU6-507P-201ENST00000516045 100 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 RNU6-1116P-201ENST00000517269 99 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 AP003357.1-201ENST00000604497 148 ntBASIC1.08□□□□□ -2.24
CHCHD3Q9NX63 RNU6-1084P-201ENST00000362498 107 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 RNU4-73P-201ENST00000363164 141 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.395-201ENST00000383945 109 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR1302-11-201ENST00000408051 138 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR1302-9-201ENST00000408365 138 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR1302-10-201ENST00000408734 138 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 SNRPGP10-201ENST00000432323 225 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 RNU7-95P-201ENST00000459222 64 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 RNU6-1007P-201ENST00000516586 107 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 SNORD45.4-201ENST00000516629 73 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 SNORA74.3-201ENST00000517108 154 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR2681-201ENST00000581814 105 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 AL133255.1-201ENST00000606374 441 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 MIR1302-2-201ENST00000607096 138 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 SNORD58B-201ENST00000607313 66 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 AL391903.3-201ENST00000612158 163 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
CHCHD3Q9NX63 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 Y_RNA.172-201ENST00000363765 102 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 RNA5SP48-201ENST00000363969 126 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 RNY3-201ENST00000365484 102 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 RNY1P14-201ENST00000384426 108 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 AL603825.1-201ENST00000438481 80 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 HMGN1P10-201ENST00000474557 553 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 SEPT14P8-201ENST00000508026 178 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 SNORA25.10-201ENST00000515926 124 ntBASIC1.06□□□□□ -2.24
CHCHD3Q9NX63 RNU6-966P-201ENST00000516479 104 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms