Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 RNU2-60P-201ENST00000517290 128 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 MIR3670-2-201ENST00000582974 65 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 MIR3670-1-201ENST00000584160 65 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 MIR3670-3-201ENST00000584855 65 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 MIR3670-4-201ENST00000612260 65 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
MSL2Q9HCI7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MSL2Q9HCI7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC018630.2-201ENST00000534866 2403 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 RNU1-96P-201ENST00000364163 162 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 SNORD61-201ENST00000384252 73 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 RNU6-160P-201ENST00000384591 107 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC003685.2-201ENST00000422795 395 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC087499.2-201ENST00000432861 149 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC107083.1-201ENST00000439643 279 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AL163195.1-201ENST00000496941 348 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 RN7SKP179-201ENST00000516126 217 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 RNU6-693P-201ENST00000516134 107 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 RNA5SP367-201ENST00000516557 118 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AC091178.2-201ENST00000584401 117 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 ZNF861P-201ENST00000588126 639 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AL033523.1-201ENST00000605153 153 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 AL022345.2-201ENST00000606307 135 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 MIR7106-201ENST00000612419 65 ntBASIC2.39□□□□□ -2.03
MSL2Q9HCI7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MSL2Q9HCI7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSL2Q9HCI7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.38□□□□□ -2.03
MSL2Q9HCI7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AP000648.3-201ENST00000623539 4507 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 SNORA26-201ENST00000391286 122 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AL590004.2-201ENST00000404787 371 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AC104389.3-201ENST00000445629 235 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AL109933.2-201ENST00000452651 260 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AL049830.1-201ENST00000468034 425 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.38□□□□□ -2.03
MSL2Q9HCI7 AL121890.5-201ENST00000620848 304 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 U6.108-201ENST00000637764 58 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MSL2Q9HCI7 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
MSL2Q9HCI7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 Y_RNA.120-201ENST00000363304 110 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 SNORA80A-201ENST00000363922 136 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 RNU6-153P-201ENST00000364422 104 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 SNORA22-201ENST00000383907 134 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 RNA5SP109-201ENST00000391010 116 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 MIR1263-201ENST00000408324 86 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 RNA5SP127-201ENST00000411051 133 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AC063976.3-201ENST00000426849 329 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AL606517.2-201ENST00000442855 241 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AL158147.1-201ENST00000443970 75 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AC003982.1-202ENST00000469928 248 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 MIR6852-201ENST00000621699 66 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 AC010297.1-201ENST00000623948 149 ntBASIC2.37□□□□□ -2.03
MSL2Q9HCI7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MSL2Q9HCI7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
MSL2Q9HCI7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MSL2Q9HCI7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.37□□□□□ -2.03
MSL2Q9HCI7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.36□□□□□ -2.03
MSL2Q9HCI7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 RNA5SP493-201ENST00000364115 91 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 RNU1-112P-201ENST00000364401 164 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 MIR548A1-201ENST00000385041 97 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MSL2Q9HCI7 AL138827.1-201ENST00000402666 306 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 AC105272.1-201ENST00000438604 198 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 UBE2DNL-203ENST00000474922 222 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 RPL23AP94-201ENST00000512518 302 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 RNU6-504P-201ENST00000516568 104 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 AC079600.2-201ENST00000550076 130 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 MIR4662B-201ENST00000579498 81 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 AC022513.1-201ENST00000624512 117 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.36□□□□□ -2.03
MSL2Q9HCI7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
MSL2Q9HCI7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MSL2Q9HCI7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MSL2Q9HCI7 SNORA25.6-201ENST00000364121 118 ntBASIC2.35□□□□□ -2.03
MSL2Q9HCI7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.35□□□□□ -2.03
MSL2Q9HCI7 RNU6-1138P-201ENST00000365359 106 ntBASIC2.35□□□□□ -2.03
MSL2Q9HCI7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.35□□□□□ -2.03
MSL2Q9HCI7 RPS29P6-201ENST00000438196 145 ntBASIC2.35□□□□□ -2.03
MSL2Q9HCI7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.35□□□□□ -2.03
MSL2Q9HCI7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
MSL2Q9HCI7 RNU6-341P-201ENST00000516973 96 ntBASIC2.35□□□□□ -2.03
MSL2Q9HCI7 ELOCP29-201ENST00000588193 334 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms