Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
UPF2Q9HAU5 RNU7-172P-201ENST00000517125 64 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 RNU6-111P-201ENST00000517179 105 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AC136628.3-201ENST00000521868 290 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AL137100.2-201ENST00000555786 315 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 MIR5094-201ENST00000578766 85 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AC006006.1-201ENST00000603082 144 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AC073413.2-201ENST00000604332 360 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AC022217.4-201ENST00000604389 163 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 snoU18.1-201ENST00000629629 71 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 AC134026.1-201ENST00000623249 2239 ntBASIC1.72□□□□□ -2.13
UPF2Q9HAU5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
UPF2Q9HAU5 U8.1-201ENST00000362843 134 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.82-201ENST00000363000 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.92-201ENST00000363043 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 RNU6-271P-201ENST00000363858 105 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.188-201ENST00000363952 111 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 SNORD27-201ENST00000363981 72 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.235-201ENST00000364412 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.306-201ENST00000365015 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.312-201ENST00000365089 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.322-201ENST00000365151 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 SNORA12.1-201ENST00000390873 148 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.71□□□□□ -2.14
UPF2Q9HAU5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.650-201ENST00000459002 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 AL163195.1-201ENST00000496941 348 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 SNORD116-28-201ENST00000516123 91 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 RNU7-99P-201ENST00000516271 62 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.777-201ENST00000516982 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 RNU6-1271P-201ENST00000517049 105 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.771-201ENST00000598668 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.789-201ENST00000622480 102 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 U6.104-201ENST00000637979 90 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 AC245060.5-201ENST00000610778 3293 ntBASIC1.71□□□□□ -2.14
UPF2Q9HAU5 MIR126-201ENST00000362291 85 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RNA5SP432-201ENST00000362480 116 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.269-201ENST00000364685 89 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 U8.7-201ENST00000364940 136 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.341-201ENST00000365341 102 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 MIR758-201ENST00000390227 88 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 AL162725.1-201ENST00000435405 301 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RPS4XP11-201ENST00000446897 772 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 AC091021.1-201ENST00000468051 388 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 SNORA70.12-201ENST00000516084 153 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 AC022254.1-201ENST00000567857 235 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 AL078604.3-201ENST00000615580 211 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
UPF2Q9HAU5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RNU6-338P-201ENST00000383888 105 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 MIR548H3-201ENST00000408771 118 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RNU6-710P-201ENST00000410424 105 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RNU7-141P-201ENST00000459304 62 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 RNA5SP437-201ENST00000517249 129 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 AL359075.3-201ENST00000613288 217 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 AC078938.1-201ENST00000620993 318 ntBASIC1.69□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.54-201ENST00000362766 105 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNU6-211P-201ENST00000384047 107 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNA5SP109-201ENST00000391010 116 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 Y_RNA.618-201ENST00000410949 107 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
UPF2Q9HAU5 AC009310.1-201ENST00000414414 451 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 BTF3P11-201ENST00000426582 477 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RPS29P23-201ENST00000458635 123 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNU7-115P-201ENST00000516433 55 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 SNORA31.10-201ENST00000516482 106 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNU6-388P-201ENST00000517012 105 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 RNU6-389P-201ENST00000517048 105 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 AL512605.2-201ENST00000592972 256 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 AL162424.1-201ENST00000602325 221 ntBASIC1.68□□□□□ -2.14
UPF2Q9HAU5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UPF2Q9HAU5 RNY1-201ENST00000364228 113 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 SNORA4.2-201ENST00000365313 147 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 RNU6-1323P-201ENST00000384025 107 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 RNU6-514P-201ENST00000384208 107 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.67□□□□□ -2.14
UPF2Q9HAU5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AC117454.1-201ENST00000491120 168 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
UPF2Q9HAU5 AC024995.1-201ENST00000523014 93 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms