Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 RNU6-1046P-201ENST00000516538 107 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RNU7-28P-201ENST00000516759 62 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 RNU7-110P-201ENST00000516891 62 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AL358944.1-201ENST00000528537 144 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 CYP3A52P-201ENST00000563326 91 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AC136932.1-201ENST00000574771 208 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 MIR3145-201ENST00000580727 82 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 DEFB117-201ENST00000602356 141 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 AC104695.3-201ENST00000604052 296 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 MIR6504-201ENST00000613520 61 ntBASIC1.28□□□□□ -2.2
RPF1Q9H9Y2 Y_RNA.28-201ENST00000362554 111 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.286-201ENST00000364813 102 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 SNORD63-201ENST00000384262 68 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 RNA5SP482-201ENST00000391269 118 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 AL590004.1-201ENST00000405321 300 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.631-201ENST00000459607 101 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 AC011373.1-201ENST00000607270 237 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.216-201ENST00000364205 93 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 RNU4-76P-201ENST00000364509 141 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 RPL39P38-201ENST00000467018 153 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 RNU6-397P-201ENST00000516226 104 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 AC011604.1-201ENST00000545978 196 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 MIR3664-201ENST00000579074 99 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 AC124312.5-201ENST00000604451 268 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.26□□□□□ -2.21
RPF1Q9H9Y2 RNU6-797P-201ENST00000363101 109 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.310-201ENST00000365063 113 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 SNORA22B-201ENST00000383876 138 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.424-201ENST00000384063 103 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RNU6-823P-201ENST00000391042 103 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RNU6-855P-201ENST00000410395 104 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RNU7-12P-201ENST00000516030 62 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RNU6-917P-201ENST00000516294 104 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 RAC1P9-201ENST00000604990 392 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 AL591926.4-201ENST00000616895 298 ntBASIC1.25□□□□□ -2.21
RPF1Q9H9Y2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 RNU6-199P-201ENST00000362954 107 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.269-201ENST00000364685 89 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 AL390729.2-201ENST00000416137 156 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 COX6CP14-201ENST00000469580 174 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 RNU6-922P-201ENST00000516753 99 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.715-201ENST00000517082 110 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 AC005972.2-201ENST00000604690 348 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 AC134503.1-201ENST00000633048 54 ntBASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
RPF1Q9H9Y2 SNORD68-201ENST00000363214 84 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.128-201ENST00000363391 112 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 SNORD41-201ENST00000386967 70 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 MTCO2P12-201ENST00000427426 682 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 AC020661.2-201ENST00000560114 134 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 MIR4300-201ENST00000581016 96 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
RPF1Q9H9Y2 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.105-201ENST00000363182 111 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.341-201ENST00000365341 102 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.368-201ENST00000365547 113 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 RNU6-102P-201ENST00000384485 104 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 RNU6-21P-201ENST00000384710 107 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 MIR548P-201ENST00000408336 84 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 PIGPP3-201ENST00000425307 415 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 Y_RNA.713-201ENST00000517013 96 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 RNU6-897P-201ENST00000517135 105 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 RNU6-988P-201ENST00000519081 107 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 AC022616.4-201ENST00000522985 181 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 AC068647.2-201ENST00000637380 353 ntBASIC1.22□□□□□ -2.21
RPF1Q9H9Y2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms