Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SNORD109B-201ENST00000458961 67 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 SNORD109A-201ENST00000459128 67 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 SNORD116-28-201ENST00000516123 91 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 AC130289.1-201ENST00000577321 73 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 AL391903.3-201ENST00000612158 163 ntBASIC2.34□□□□□ -2.03
PIF1Q9H611 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PIF1Q9H611 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.33□□□□□ -2.04
PIF1Q9H611 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 Y_RNA.336-201ENST00000365307 109 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 RNU6-163P-201ENST00000384396 106 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 MIR891A-201ENST00000401237 79 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 Y_RNA.626-201ENST00000411288 95 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 AC004965.1-201ENST00000413033 213 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 RPL23AP42-201ENST00000471152 471 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 AC099513.1-201ENST00000490423 301 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 RNA5SP168-201ENST00000516642 112 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 AC021269.2-201ENST00000532318 330 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 AC011921.3-201ENST00000605540 361 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 SNORD3E-202ENST00000627253 216 ntBASIC2.33□□□□□ -2.04
PIF1Q9H611 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PIF1Q9H611 AC062016.1-201ENST00000355719 319 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 Y_RNA.83-201ENST00000363005 113 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 RNU6-653P-201ENST00000363074 106 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 RNU2-52P-201ENST00000410680 190 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 AL139156.1-201ENST00000412785 841 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 MLLT10P1-201ENST00000418346 262 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 MTND5P15-201ENST00000434246 349 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 snoU13.9-201ENST00000458927 103 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 AC008834.1-201ENST00000511612 175 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 RNU6-138P-201ENST00000515952 107 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
PIF1Q9H611 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PIF1Q9H611 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.31□□□□□ -2.04
PIF1Q9H611 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PIF1Q9H611 SNORD14E-201ENST00000364009 85 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 RNU6-200P-201ENST00000364743 107 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 MIR194-1-201ENST00000384892 85 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 MIR616-201ENST00000385293 97 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 MIR676-201ENST00000390702 67 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 SNORA26-201ENST00000391286 122 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 RNU2-55P-201ENST00000411146 174 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 AL161935.2-201ENST00000414627 60 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.31□□□□□ -2.04
PIF1Q9H611 SNORD11-201ENST00000459124 84 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 RNU7-12P-201ENST00000516030 62 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 MIR3162-201ENST00000581818 82 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 AL021707.8-201ENST00000609428 183 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 uc_338.4-201ENST00000616635 176 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
PIF1Q9H611 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PIF1Q9H611 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PIF1Q9H611 Y_RNA.24-201ENST00000362508 103 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 Y_RNA.121-201ENST00000363309 113 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 RNU6-442P-201ENST00000383968 104 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 MT-TR-201ENST00000387439 65 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 RNU6-1228P-201ENST00000391014 107 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.3□□□□□ -2.04
PIF1Q9H611 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.3□□□□□ -2.04
PIF1Q9H611 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.3□□□□□ -2.04
PIF1Q9H611 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PIF1Q9H611 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PIF1Q9H611 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PIF1Q9H611 SNORA5B-201ENST00000363786 132 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 Y_RNA.274-201ENST00000364714 101 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 Y_RNA.297-201ENST00000364950 91 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 U8.16-201ENST00000391279 133 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 RNU6-383P-201ENST00000410864 94 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.29□□□□□ -2.04
PIF1Q9H611 CALM2P4-201ENST00000430810 426 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 AL138752.1-201ENST00000452964 351 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.29□□□□□ -2.04
PIF1Q9H611 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.29□□□□□ -2.04
PIF1Q9H611 MIR4319-201ENST00000577285 85 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PIF1Q9H611 AL365361.1-201ENST00000566942 3481 ntBASIC2.29□□□□□ -2.04
PIF1Q9H611 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
PIF1Q9H611 MIRLET7C-201ENST00000362160 84 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 MIR411-201ENST00000362239 96 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 Y_RNA.229-201ENST00000364347 113 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 RNU6-1138P-201ENST00000365359 106 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 RNU6-439P-201ENST00000384188 106 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 MIR452-201ENST00000385020 85 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 MIR15B-201ENST00000385045 98 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.28□□□□□ -2.04
PIF1Q9H611 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.28□□□□□ -2.04
PIF1Q9H611 SNORD45.4-201ENST00000516629 73 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 SNORA77B-201ENST00000578179 125 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 AC008507.4-201ENST00000585464 127 ntBASIC2.28□□□□□ -2.04
PIF1Q9H611 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PIF1Q9H611 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PIF1Q9H611 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms