Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RNF38Q9H0F5 RNU1-91P-201ENST00000364746 163 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 Y_RNA.280-201ENST00000364765 112 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 MTCO1P44-201ENST00000441935 243 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 RNU6-589P-201ENST00000516485 107 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 RNU2-34P-201ENST00000516534 121 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 MIR3121-201ENST00000579680 77 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 MIR4298-201ENST00000584380 73 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 AC073413.2-201ENST00000604332 360 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF38Q9H0F5 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 U6.95-201ENST00000636931 70 ntBASIC2.76□□□□□ -1.97
RNF38Q9H0F5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
RNF38Q9H0F5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
RNF38Q9H0F5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RNF38Q9H0F5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 RNU6-309P-201ENST00000364573 106 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 Y_RNA.486-201ENST00000384398 107 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 MIR562-201ENST00000384894 95 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 RNU6-1186P-201ENST00000410429 97 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF38Q9H0F5 SNORA18.4-201ENST00000516440 124 ntBASIC2.75□□□□□ -1.97
RNF38Q9H0F5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF38Q9H0F5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF38Q9H0F5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC233266.1-201ENST00000454518 96 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 OR9P1P-201ENST00000496431 281 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC093259.1-201ENST00000509755 300 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 RNU6-781P-201ENST00000516377 101 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 RNU1-104P-201ENST00000517280 175 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC004486.1-201ENST00000546846 233 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC097639.2-201ENST00000603159 172 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC242852.1-201ENST00000612151 96 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 U6.73-201ENST00000619194 103 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 AC244015.1-201ENST00000622301 99 ntBASIC2.74□□□□□ -1.97
RNF38Q9H0F5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF38Q9H0F5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF38Q9H0F5 RNU6-1298P-201ENST00000362456 101 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 Y_RNA.52-201ENST00000362760 96 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 SNORD58C-201ENST00000365223 64 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 RNU1-148P-201ENST00000384472 162 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 SRIP3-201ENST00000413200 219 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 AC060773.1-201ENST00000421698 310 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 AC007751.1-201ENST00000529260 376 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 MIR3126-201ENST00000577443 74 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 AL670379.3-201ENST00000605040 251 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.73□□□□□ -1.97
RNF38Q9H0F5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
RNF38Q9H0F5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RNF38Q9H0F5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF38Q9H0F5 MIR548A3-201ENST00000385297 97 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 SNORA12.1-201ENST00000390873 148 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 SNORA26-201ENST00000391286 122 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 AL603914.1-201ENST00000401964 204 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 AC123900.1-201ENST00000420390 96 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RPS26P45-201ENST00000471748 340 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RNU6-856P-201ENST00000516959 98 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 MIR3613-201ENST00000579844 87 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 MIR3129-201ENST00000581095 76 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 U2.20-201ENST00000613956 192 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 AL121890.5-201ENST00000620848 304 ntBASIC2.72□□□□□ -1.97
RNF38Q9H0F5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
RNF38Q9H0F5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF38Q9H0F5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF38Q9H0F5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
RNF38Q9H0F5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RNF38Q9H0F5 MIR340-201ENST00000362125 95 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.35-201ENST00000362601 101 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 SNORD116-21-201ENST00000384507 92 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 SNORA67.4-201ENST00000384688 142 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 RNA5SP127-201ENST00000411051 133 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
RNF38Q9H0F5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 RNU6-365P-201ENST00000517113 106 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 AL022345.2-201ENST00000606307 135 ntBASIC2.71□□□□□ -1.98
RNF38Q9H0F5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 RNU6-647P-201ENST00000364243 107 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 RNU6-755P-201ENST00000364400 103 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.7□□□□□ -1.98
RNF38Q9H0F5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms