Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AL390729.2-201ENST00000416137 156 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 BTF3P4-201ENST00000418852 495 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC108210.2-201ENST00000503681 201 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC114811.1-201ENST00000507207 168 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC022616.4-201ENST00000522985 181 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 MIR4295-201ENST00000585286 85 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 DEFB117-201ENST00000602356 141 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AL022345.2-201ENST00000606307 135 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 Y_RNA.772-201ENST00000606692 102 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 AC006157.1-201ENST00000611750 366 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.84□□□□□ -2.27
HDHD3Q9BSH5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 MIR369-201ENST00000362155 70 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNU6-324P-201ENST00000363957 106 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNA5SP99-201ENST00000364020 114 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.222-201ENST00000364264 102 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.286-201ENST00000364813 102 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.331-201ENST00000365267 102 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.336-201ENST00000365307 109 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.456-201ENST00000384232 111 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNU6-474P-201ENST00000384243 107 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 RNU6-937P-201ENST00000384325 106 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 MIR891A-201ENST00000401237 79 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 U8.20-201ENST00000459445 131 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AC040926.1-201ENST00000530195 238 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AC015712.3-201ENST00000559380 164 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AL096861.1-201ENST00000610899 123 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 AL353997.5-201ENST00000618886 171 ntBASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.148-201ENST00000363557 117 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.439-201ENST00000384119 94 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 MIR19B1-201ENST00000384829 87 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 AL451046.2-201ENST00000403074 277 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 MIR1298-201ENST00000408783 112 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 RNU4-30P-201ENST00000410245 143 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 RPL23AP36-201ENST00000413895 458 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 MTND4LP11-201ENST00000422184 280 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 PIGPP3-201ENST00000425307 415 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 SNRPGP10-201ENST00000432323 225 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 AC104332.1-201ENST00000440471 797 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 snoU13.23-201ENST00000458863 104 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 AP003716.2-201ENST00000528260 108 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 AC104695.3-201ENST00000604052 296 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 AP003357.1-201ENST00000604497 148 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 MIR6078-201ENST00000611069 100 ntBASIC0.82□□□□□ -2.28
HDHD3Q9BSH5 SNORD68-201ENST00000363214 84 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.143-201ENST00000363520 106 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 SNORD50B-201ENST00000364995 70 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.341-201ENST00000365341 102 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RNU6-308P-201ENST00000390957 107 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RNU6-855P-201ENST00000410395 104 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RNU6-710P-201ENST00000410424 105 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 HMGN1P7-201ENST00000491722 313 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RNU7-115P-201ENST00000516433 55 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 MIR3145-201ENST00000580727 82 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 RPS29P30-201ENST00000600975 111 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 BX284668.6-201ENST00000606899 438 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 AC011373.1-201ENST00000607270 237 ntBASIC0.81□□□□□ -2.28
HDHD3Q9BSH5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 RNU6-801P-201ENST00000364087 105 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 RNU4-50P-201ENST00000364361 141 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.813-201ENST00000364639 102 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 U8.7-201ENST00000364940 136 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 SNORD14.1-201ENST00000365609 90 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.471-201ENST00000384312 102 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.526-201ENST00000384572 110 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 RNU6-1105P-201ENST00000384774 107 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 SNRPGP14-201ENST00000435400 219 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 RNU6-1046P-201ENST00000516538 107 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 AC090142.3-201ENST00000519012 385 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 FAM106DP-201ENST00000586416 501 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
HDHD3Q9BSH5 Y_RNA.105-201ENST00000363182 111 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms