Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 SNORD68-201ENST00000363214 84 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 SNORD63-201ENST00000384262 68 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 SNORA72-201ENST00000384339 132 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 U8.20-201ENST00000459445 131 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 AL133373.1-201ENST00000497098 94 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 SNORD116-28-201ENST00000516123 91 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 AL080274.1-201ENST00000605565 220 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 AL022345.2-201ENST00000606307 135 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 AL050343.2-201ENST00000607338 280 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
SDF4Q9BRK5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.33□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.395-201ENST00000383945 109 ntBASIC1.33□□□□□ -2.2
SDF4Q9BRK5 RNU6-1323P-201ENST00000384025 107 ntBASIC1.33□□□□□ -2.2
SDF4Q9BRK5 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
SDF4Q9BRK5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SDF4Q9BRK5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.33□□□□□ -2.2
SDF4Q9BRK5 SNORA31.4-201ENST00000516049 129 ntBASIC1.33□□□□□ -2.2
SDF4Q9BRK5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.310-201ENST00000365063 113 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.439-201ENST00000384119 94 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.551-201ENST00000384661 102 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 MIR526A1-201ENST00000384897 85 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC104332.1-201ENST00000440471 797 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC114811.1-201ENST00000507207 168 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 RNU6-1170P-201ENST00000515974 106 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.32□□□□□ -2.2
SDF4Q9BRK5 BX284668.6-201ENST00000606899 438 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC011373.1-201ENST00000607270 237 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 AC006157.1-201ENST00000611750 366 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 uc_338.22-201ENST00000622722 187 ntBASIC1.32□□□□□ -2.2
SDF4Q9BRK5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
SDF4Q9BRK5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.80-201ENST00000362996 102 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 SNORD81.1-201ENST00000363064 77 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RNU4-50P-201ENST00000364361 141 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.253-201ENST00000364562 112 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.431-201ENST00000384086 102 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.485-201ENST00000384395 102 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR452-201ENST00000385020 85 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR522-201ENST00000385071 87 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR1302-11-201ENST00000408051 138 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR1302-9-201ENST00000408365 138 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR1302-10-201ENST00000408734 138 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RNU6-855P-201ENST00000410395 104 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 AC022028.1-201ENST00000412054 408 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 PIGPP3-201ENST00000425307 415 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 AC024067.1-201ENST00000426199 223 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RPS23P4-201ENST00000487908 423 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RNU7-116P-201ENST00000516940 62 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SDF4Q9BRK5 MIR1302-2-201ENST00000607096 138 ntBASIC1.31□□□□□ -2.2
SDF4Q9BRK5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
SDF4Q9BRK5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SDF4Q9BRK5 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 SNORA25.9-201ENST00000365087 128 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.341-201ENST00000365341 102 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 MTND1P14-201ENST00000427400 950 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 FAM106DP-201ENST00000586416 501 ntBASIC1.3□□□□□ -2.2
SDF4Q9BRK5 LINC01399-202ENST00000458450 244 ntBASIC1.29□□□□□ -2.2
SDF4Q9BRK5 COX6CP14-201ENST00000469580 174 ntBASIC1.29□□□□□ -2.2
SDF4Q9BRK5 RNU7-110P-201ENST00000516891 62 ntBASIC1.29□□□□□ -2.2
SDF4Q9BRK5 AC040926.1-201ENST00000530195 238 ntBASIC1.29□□□□□ -2.2
SDF4Q9BRK5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.29□□□□□ -2.2
SDF4Q9BRK5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SDF4Q9BRK5 SNORD42.2-201ENST00000365570 69 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 SNORD14.1-201ENST00000365609 90 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 AC117470.1-201ENST00000381974 330 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.471-201ENST00000384312 102 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 RNU6-910P-201ENST00000390844 107 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 Y_RNA.639-201ENST00000458981 102 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 HMGN1P10-201ENST00000474557 553 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.28□□□□□ -2.2
SDF4Q9BRK5 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.28□□□□□ -2.2
SDF4Q9BRK5 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 DEFB117-201ENST00000602356 141 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 AC007485.1-201ENST00000616755 206 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 AL008636.1-201ENST00000625038 1018 ntBASIC1.28□□□□□ -2.2
SDF4Q9BRK5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.2
SDF4Q9BRK5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SDF4Q9BRK5 MIR1298-201ENST00000408783 112 ntBASIC1.27□□□□□ -2.21
SDF4Q9BRK5 MTND4LP11-201ENST00000422184 280 ntBASIC1.27□□□□□ -2.21
SDF4Q9BRK5 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
SDF4Q9BRK5 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms