Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 RNA5SP511-201ENST00000410487 115 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-1203P-201ENST00000410703 110 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 AC015720.1-201ENST00000565251 277 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 AC091178.2-201ENST00000584401 117 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 MIR8070-201ENST00000616510 88 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 MIR8054-201ENST00000620877 86 ntBASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.81□□□□□ -2.12
CLSTN3Q9BQT9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 RNU4-80P-201ENST00000363200 141 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 MIR518E-201ENST00000385252 88 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 MT-TW-201ENST00000387382 68 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-440P-201ENST00000390882 105 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AP1B1P2-201ENST00000416196 106 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AC091021.1-201ENST00000468051 388 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AC005840.1-201ENST00000498412 377 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-191P-201ENST00000516295 94 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-63P-201ENST00000516690 95 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AC136628.3-201ENST00000521868 290 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 AL161670.1-201ENST00000554348 137 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.16-201ENST00000362421 102 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.396-201ENST00000383949 103 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.418-201ENST00000384029 102 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.461-201ENST00000384263 103 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 SNORA72-201ENST00000384339 132 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-136P-201ENST00000384663 107 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 RNA5SP482-201ENST00000391269 118 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 AC233266.1-201ENST00000454518 96 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 MIR3145-201ENST00000580727 82 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 AC004832.4-201ENST00000608952 331 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 AC242852.1-201ENST00000612151 96 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 AC244015.1-201ENST00000622301 99 ntBASIC1.79□□□□□ -2.12
CLSTN3Q9BQT9 AC100821.1-201ENST00000523153 2479 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-472P-201ENST00000384299 107 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 Y_RNA.483-201ENST00000384380 101 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MIR30A-201ENST00000385092 71 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MTCO1P5-201ENST00000433573 344 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 RNU7-34P-201ENST00000459394 64 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 AL049830.1-201ENST00000468034 425 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 SERF1AP1-201ENST00000514575 187 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 RNU6-1338P-201ENST00000516328 91 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 CBX3P4-201ENST00000538909 354 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 AC068647.2-201ENST00000637380 353 ntBASIC1.78□□□□□ -2.12
CLSTN3Q9BQT9 MIR335-201ENST00000362173 94 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.144-201ENST00000363521 113 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-574P-201ENST00000384265 107 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-196P-201ENST00000384315 107 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 SNORD116-13-201ENST00000384408 92 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 RPL30P13-201ENST00000418873 348 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 JTBP1-201ENST00000441314 247 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 MIR4503-201ENST00000582187 83 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 AL078604.3-201ENST00000615580 211 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 AP001282.2-201ENST00000616149 309 ntBASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CLSTN3Q9BQT9 AL391987.6-201ENST00000305671 199 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-463P-201ENST00000384340 107 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 MIR1267-201ENST00000408723 78 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AL606517.2-201ENST00000442855 241 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 RPS4XP11-201ENST00000446897 772 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 SNORA27.4-201ENST00000516650 95 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 DEFB108E-201ENST00000524692 240 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AC011604.1-201ENST00000545978 196 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 POLR3GP1-201ENST00000594073 261 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AL929325.1-201ENST00000603096 117 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AP003357.1-201ENST00000604497 148 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.76□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 PGBD4P5-201ENST00000445958 426 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 SNORA31.10-201ENST00000516482 106 ntBASIC1.75□□□□□ -2.13
CLSTN3Q9BQT9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms