Protein–RNA interactions for Protein: Q9BQ31

KCNS3, Potassium voltage-gated channel subfamily S member 3, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3Q9BQ31 AL390729.2-201ENST00000416137 156 ntBASIC0.46□□□□□ -2.34
KCNS3Q9BQ31 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.46□□□□□ -2.34
KCNS3Q9BQ31 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.46□□□□□ -2.34
KCNS3Q9BQ31 AC092794.2-201ENST00000620933 563 ntBASIC0.46□□□□□ -2.34
KCNS3Q9BQ31 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
KCNS3Q9BQ31 Y_RNA.88-201ENST00000363029 99 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 Y_RNA.101-201ENST00000363154 102 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 RNA5SP48-201ENST00000363969 126 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 RNU6-510P-201ENST00000391239 108 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 MTND3P8-201ENST00000412909 339 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 AC107399.1-201ENST00000451226 265 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 RPL17P19-201ENST00000489069 552 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 SNORD45.4-201ENST00000516629 73 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 AC036111.3-201ENST00000526389 112 ntBASIC0.45□□□□□ -2.34
KCNS3Q9BQ31 RNU6-623P-201ENST00000363143 105 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 RNU6-99P-201ENST00000364721 107 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 RNU6-926P-201ENST00000384075 107 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 Y_RNA.482-201ENST00000384377 111 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 MIR489-201ENST00000384923 84 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 MIR15B-201ENST00000385045 98 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 MIR548F1-201ENST00000408667 84 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 MLLT10P1-201ENST00000418346 262 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 AC011352.1-201ENST00000512300 793 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 RNU7-43P-201ENST00000516554 64 ntBASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.44□□□□□ -2.34
KCNS3Q9BQ31 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 MIR1302-7-201ENST00000408841 72 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU2-54P-201ENST00000410299 190 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU2-61P-201ENST00000411069 191 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 MIR2053-201ENST00000459295 91 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 SNORD123-201ENST00000459473 70 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AC116353.2-201ENST00000505332 712 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU6-718P-201ENST00000516166 105 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1110P-201ENST00000516462 101 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1213P-201ENST00000517075 94 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 MIR2355-201ENST00000517199 87 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AC025627.3-201ENST00000582078 182 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AC005899.2-201ENST00000584353 90 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 AC240442.1-201ENST00000616055 283 ntBASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.43□□□□□ -2.34
KCNS3Q9BQ31 RNU6-654P-201ENST00000364373 107 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 SNORD50B-201ENST00000364995 70 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 SNORA75.4-201ENST00000391278 119 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1199P-201ENST00000411249 104 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1304P-201ENST00000411374 106 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 MRPS18CP6-201ENST00000423587 223 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 MTND4P28-201ENST00000426217 387 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AL392103.1-201ENST00000447000 198 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-120P-201ENST00000516077 103 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-966P-201ENST00000516479 104 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1012P-201ENST00000516606 109 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AC022616.4-201ENST00000522985 181 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AC060780.3-201ENST00000589464 80 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AC006380.1-201ENST00000603598 186 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 PISRT1.1-201ENST00000616930 107 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AC087588.2-201ENST00000617667 426 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
KCNS3Q9BQ31 RNU6-1084P-201ENST00000362498 107 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 snoU2-30.1-201ENST00000365012 70 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 Y_RNA.592-201ENST00000410274 109 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 RNU6-994P-201ENST00000410507 111 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 MTATP6P26-201ENST00000445926 662 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 CHEK2P4-201ENST00000450340 246 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 RPL30P15-201ENST00000457129 321 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 RNU6-307P-201ENST00000516743 106 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 AF235103.2-201ENST00000525753 346 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 MIR7111-201ENST00000619751 72 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 MIR6516-201ENST00000630554 81 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 AL669831.3-213ENST00000636676 183 ntBASIC0.41□□□□□ -2.34
KCNS3Q9BQ31 RNU1-119P-201ENST00000391122 165 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 MIR936-201ENST00000401264 98 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 SNORD111-201ENST00000408139 94 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 MIR1277-201ENST00000408536 78 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 RNA5SP95-201ENST00000410319 137 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 SNRPGP10-201ENST00000432323 225 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 HMGN2P32-201ENST00000444648 269 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 RNU11-2P-201ENST00000516898 142 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC011195.1-201ENST00000578177 177 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC007742.2-201ENST00000618226 398 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 AC008133.2-201ENST00000624540 351 ntBASIC0.4□□□□□ -2.35
KCNS3Q9BQ31 Y_RNA.318-201ENST00000365131 97 ntBASIC0.39□□□□□ -2.35
KCNS3Q9BQ31 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms