Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.641-201ENST00000459414 105 ntBASIC1.85□□□□□ -2.11
NPAS1Q99742 AC006006.1-201ENST00000603082 144 ntBASIC1.85□□□□□ -2.11
NPAS1Q99742 AC013791.1-201ENST00000616619 62 ntBASIC1.85□□□□□ -2.11
NPAS1Q99742 AC100821.1-201ENST00000523153 2479 ntBASIC1.85□□□□□ -2.11
NPAS1Q99742 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NPAS1Q99742 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NPAS1Q99742 Y_RNA.562-201ENST00000384695 113 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 RNU6-360P-201ENST00000390944 104 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.84□□□□□ -2.11
NPAS1Q99742 AC009310.1-201ENST00000414414 451 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 FTH1P12-201ENST00000432137 551 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AL021397.1-201ENST00000451806 248 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.84□□□□□ -2.11
NPAS1Q99742 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AC127455.1-201ENST00000565496 145 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 JPX_2.1-201ENST00000614161 69 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 AL078604.3-201ENST00000615580 211 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
NPAS1Q99742 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
NPAS1Q99742 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.12
NPAS1Q99742 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPAS1Q99742 MIR367-201ENST00000362299 68 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 Y_RNA.60-201ENST00000362831 98 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 Y_RNA.518-201ENST00000384552 113 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 RNU6-651P-201ENST00000411040 105 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 RNU6-437P-201ENST00000459408 95 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 SNORA31.10-201ENST00000516482 106 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 RNU7-28P-201ENST00000516759 62 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 AL358944.1-201ENST00000528537 144 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 AC005357.1-201ENST00000588399 301 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 AL008718.3-201ENST00000610217 321 ntBASIC1.83□□□□□ -2.12
NPAS1Q99742 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
NPAS1Q99742 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
NPAS1Q99742 MIR126-201ENST00000362291 85 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 RNU6-144P-201ENST00000383951 107 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 Y_RNA.476-201ENST00000384347 108 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 RNA5SP482-201ENST00000391269 118 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 RN7SKP192-201ENST00000411291 327 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 AC025033.1-201ENST00000463883 194 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 RNU6-1023P-201ENST00000516137 106 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 Y_RNA.714-201ENST00000517065 90 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 MIR2681-201ENST00000581814 105 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 AC073349.3-201ENST00000617616 186 ntBASIC1.82□□□□□ -2.12
NPAS1Q99742 Y_RNA.122-201ENST00000363331 96 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 Y_RNA.203-201ENST00000364106 102 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 RNU6-1031P-201ENST00000384773 107 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NPAS1Q99742 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NPAS1Q99742 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NPAS1Q99742 AC023449.1-201ENST00000454464 154 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 Y_RNA.638-201ENST00000459374 113 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 Y_RNA.680-201ENST00000516441 93 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 MIR4724-201ENST00000579485 89 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 AL096840.1-201ENST00000603287 93 ntBASIC1.81□□□□□ -2.12
NPAS1Q99742 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NPAS1Q99742 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
NPAS1Q99742 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.81□□□□□ -2.12
NPAS1Q99742 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NPAS1Q99742 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPAS1Q99742 Y_RNA.20-201ENST00000362479 113 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 RNU6-1084P-201ENST00000362498 107 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 Y_RNA.269-201ENST00000364685 89 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 RNU6-338P-201ENST00000383888 105 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NPAS1Q99742 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 MIR4643-201ENST00000577473 78 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 Y_RNA.802-201ENST00000614892 130 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 AL591926.4-201ENST00000616895 298 ntBASIC1.8□□□□□ -2.12
NPAS1Q99742 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NPAS1Q99742 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NPAS1Q99742 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.82-201ENST00000363000 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.92-201ENST00000363043 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.235-201ENST00000364412 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.292-201ENST00000364904 97 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.306-201ENST00000365015 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.312-201ENST00000365089 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.322-201ENST00000365151 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 SNORA8.3-201ENST00000384679 139 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 MIR802-201ENST00000390235 94 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 MIR1261-201ENST00000408659 82 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 MIR1278-201ENST00000408753 81 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 RNU6-383P-201ENST00000410864 94 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 SNRPGP10-201ENST00000432323 225 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.650-201ENST00000459002 102 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 MTND1P19-201ENST00000511780 315 ntBASIC1.79□□□□□ -2.12
NPAS1Q99742 Y_RNA.777-201ENST00000516982 102 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms