Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MTND5P34-201ENST00000568888 325 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 AC080013.3-201ENST00000606839 578 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 MIR4251-201ENST00000635819 61 ntBASIC-1.08□□□□□ -2.58
COL12A1Q99715 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AL035461.1-201ENST00000421490 332 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU7-185P-201ENST00000459215 60 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU1-142P-201ENST00000516682 145 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU7-188P-201ENST00000517063 64 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 SNORA74.3-201ENST00000517108 154 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 MIR544B-201ENST00000582372 78 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC092656.1-203ENST00000624134 423 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AL589826.1-201ENST00000340697 249 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC008134.1-201ENST00000420943 193 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU7-43P-201ENST00000516554 64 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 SNORA40.17-201ENST00000517256 115 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL12A1Q99715 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 VN1R88P-201ENST00000596787 292 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL12A1Q99715 SNORD115-16-201ENST00000363887 82 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL12A1Q99715 MTND1P27-201ENST00000451117 902 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RPL7P42-201ENST00000481005 679 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 RNU6-107P-201ENST00000516643 102 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AC108747.1-201ENST00000609508 535 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 AL163152.1-201ENST00000642001 374 ntBASIC-1.09□□□□□ -2.58
COL12A1Q99715 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 RNU4-92P-201ENST00000363783 136 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 RNU6-424P-201ENST00000384367 105 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 RPS29P13-201ENST00000402041 169 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 MIR548H3-201ENST00000408771 118 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 AF186996.7-201ENST00000492781 209 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 SNRPGP1-201ENST00000553864 222 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 MIR4423-201ENST00000580922 80 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 SNORA28-201ENST00000606769 126 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 SNORD114-13-201ENST00000364377 74 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-1.1□□□□□ -2.59
COL12A1Q99715 MTATP6P17-201ENST00000431030 672 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.1□□□□□ -2.59
COL12A1Q99715 AC068339.1-201ENST00000526965 141 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 AL359880.1-201ENST00000621879 266 ntBASIC-1.1□□□□□ -2.59
COL12A1Q99715 RNU6-873P-201ENST00000363833 107 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-188P-201ENST00000364207 107 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 MIR548I3-201ENST00000408378 149 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 MTND1P11-201ENST00000456661 876 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-685P-201ENST00000517088 95 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 AC005776.1-201ENST00000603164 290 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 AC010999.1-201ENST00000611856 324 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 snoR1.1-201ENST00000628177 80 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-386P-201ENST00000362650 107 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 SNORD41.1-201ENST00000391000 69 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 MIR1257-201ENST00000408490 117 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.11□□□□□ -2.59
COL12A1Q99715 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-856P-201ENST00000516959 98 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 AC099785.1-201ENST00000605697 437 ntBASIC-1.11□□□□□ -2.59
COL12A1Q99715 RNU6-653P-201ENST00000363074 106 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-509P-201ENST00000363519 107 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-417P-201ENST00000384712 107 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.12□□□□□ -2.59
COL12A1Q99715 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 MTCO3P38-201ENST00000468910 766 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL12A1Q99715 SNORD68-201ENST00000363214 84 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 MIR19A-201ENST00000384878 82 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-817P-201ENST00000391083 104 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC025459.1-201ENST00000504072 156 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-168P-201ENST00000516189 101 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC011374.2-201ENST00000607135 526 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC007283.2-201ENST00000424739 197 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU7-14P-201ENST00000459331 62 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-175P-201ENST00000516896 107 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL12A1Q99715 AL159153.1-201ENST00000619688 317 ntBASIC-1.12□□□□□ -2.59
COL12A1Q99715 RNU6-79P-201ENST00000362511 107 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 RNU6-932P-201ENST00000391108 106 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 MTND2P38-201ENST00000522536 667 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.13□□□□□ -2.59
COL12A1Q99715 AC069431.2-201ENST00000604149 1099 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 SNORD45.3-201ENST00000363836 72 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 RNU6-843P-201ENST00000384454 104 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 PSMA6P3-201ENST00000428242 164 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 MTATP6P14-201ENST00000455189 673 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 snoU13.10-201ENST00000459301 103 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 AC097484.2-201ENST00000509147 251 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 RNU2-34P-201ENST00000516534 121 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.13□□□□□ -2.59
COL12A1Q99715 Z99497.2-201ENST00000603634 310 ntBASIC-1.13□□□□□ -2.59
COL12A1Q99715 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms