Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC100821.1-201ENST00000523153 2479 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA63D-201ENST00000364359 132 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.292-201ENST00000364904 97 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.552-201ENST00000384665 112 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 MIR562-201ENST00000384894 95 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
CDK5RAP3Q96JB5 AC068700.1-201ENST00000565862 3754 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6-296P-201ENST00000384608 107 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 AC009310.1-201ENST00000414414 451 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP437-201ENST00000517249 129 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 AC022254.1-201ENST00000567857 235 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 AC090425.1-201ENST00000610007 140 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDK5RAP3Q96JB5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 RNU2-56P-201ENST00000516826 190 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 AL929325.1-201ENST00000603096 117 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 AC141273.2-201ENST00000618989 130 ntBASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDK5RAP3Q96JB5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA1B-201ENST00000362535 133 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA4.2-201ENST00000365313 147 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.515-201ENST00000384535 112 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 AC019129.1-201ENST00000403786 261 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6-437P-201ENST00000459408 95 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA31.17-201ENST00000516953 127 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 AP002004.2-201ENST00000531656 154 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 MIR8054-201ENST00000620877 86 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 AL365265.1-201ENST00000621045 234 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 AC092881.1-201ENST00000638218 2733 ntBASIC2.16□□□□□ -2.06
CDK5RAP3Q96JB5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.15□□□□□ -2.06
CDK5RAP3Q96JB5 RNU4-10P-201ENST00000364383 140 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 RNY4P28-201ENST00000365281 93 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-144P-201ENST00000383951 107 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-440P-201ENST00000390882 105 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 AL049830.1-201ENST00000468034 425 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 AC011921.3-201ENST00000605540 361 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.15□□□□□ -2.07
CDK5RAP3Q96JB5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 RNY1-201ENST00000364228 113 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.304-201ENST00000365011 112 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 AL445685.2-201ENST00000422551 342 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 HSPE1P9-201ENST00000440046 311 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 SNORA31.10-201ENST00000516482 106 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 RNA5SP481-201ENST00000516814 122 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 AL358944.1-201ENST00000528537 144 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.802-201ENST00000614892 130 ntBASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CDK5RAP3Q96JB5 MIR367-201ENST00000362299 68 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.199-201ENST00000364014 102 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.200-201ENST00000364018 102 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.257-201ENST00000364596 102 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.262-201ENST00000364641 102 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-1318P-201ENST00000365389 103 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 MIR1298-201ENST00000408783 112 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-383P-201ENST00000410864 94 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-847P-201ENST00000411115 108 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 Y_RNA.626-201ENST00000411288 95 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 MIR4724-201ENST00000579485 89 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 AC009779.6-201ENST00000603972 165 ntBASIC2.13□□□□□ -2.07
CDK5RAP3Q96JB5 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 RNU6-950P-201ENST00000384651 107 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 SNORA8.3-201ENST00000384679 139 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 RN7SKP200-201ENST00000410564 320 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 COX6CP10-201ENST00000416832 224 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 STAG3L5P-204ENST00000443759 179 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 AC103810.8-201ENST00000607347 118 ntBASIC2.12□□□□□ -2.07
CDK5RAP3Q96JB5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms