Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC97Q96F63 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC97Q96F63 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC97Q96F63 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CCDC97Q96F63 AL157777.2-201ENST00000258070 137 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 RNU6-1082P-201ENST00000364574 107 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC97Q96F63 RNU6-442P-201ENST00000383968 104 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC97Q96F63 SNORD45.4-201ENST00000516629 73 ntBASIC3.19□□□□□ -1.9
CCDC97Q96F63 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC97Q96F63 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC97Q96F63 SNORA19-201ENST00000384737 128 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 SNORD23.1-201ENST00000408212 104 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 CYCSP49-201ENST00000420810 319 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 SUMO1P4-201ENST00000429430 302 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC105272.1-201ENST00000438604 198 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC97Q96F63 RNA5SP272-201ENST00000516095 111 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 RNA5SP481-201ENST00000516814 122 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC004486.1-201ENST00000546846 233 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC078899.2-201ENST00000595282 212 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 AC091895.1-201ENST00000624494 256 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC97Q96F63 MIR6733-201ENST00000635723 61 ntBASIC3.18□□□□□ -1.9
CCDC97Q96F63 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC97Q96F63 SNORA80A-201ENST00000363922 136 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 SNORA67.1-201ENST00000364749 141 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 RNU6-1336P-201ENST00000383886 109 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC97Q96F63 RNU7-34P-201ENST00000459394 64 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 AC055731.1-201ENST00000474387 401 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC97Q96F63 Y_RNA.666-201ENST00000516187 112 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 AC090142.3-201ENST00000519012 385 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 U2.22-201ENST00000636441 106 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.17□□□□□ -1.9
CCDC97Q96F63 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC97Q96F63 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC97Q96F63 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC97Q96F63 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 SNORD24-201ENST00000383884 75 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 SNORA80E-201ENST00000384744 137 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 RNU6-1031P-201ENST00000384773 107 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 RNA5SP100-201ENST00000410903 110 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 RNA5SP59-201ENST00000410922 110 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 SNRPGP13-201ENST00000442212 177 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 HMGN2P32-201ENST00000444648 269 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 RNU7-197P-201ENST00000458836 62 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 AC092991.1-201ENST00000477176 376 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 CYCTP-201ENST00000504253 315 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 SNORA31.15-201ENST00000516771 132 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 RNU6-1270P-201ENST00000517128 108 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 AC007751.1-201ENST00000529260 376 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 MIR4709-201ENST00000577272 72 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 FO624990.1-201ENST00000636373 85 ntBASIC3.16□□□□□ -1.9
CCDC97Q96F63 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC97Q96F63 AC010332.2-201ENST00000613083 1904 ntBASIC3.15□□□□□ -1.9
CCDC97Q96F63 SNORD61-201ENST00000384252 73 ntBASIC3.15□□□□□ -1.91
CCDC97Q96F63 RNU6-163P-201ENST00000384396 106 ntBASIC3.15□□□□□ -1.91
CCDC97Q96F63 snoU13.27-201ENST00000459278 104 ntBASIC3.15□□□□□ -1.91
CCDC97Q96F63 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCDC97Q96F63 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC97Q96F63 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCDC97Q96F63 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC97Q96F63 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC97Q96F63 MIRLET7C-201ENST00000362160 84 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 RNU6-888P-201ENST00000363010 101 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 RNA5SP393-201ENST00000363423 117 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 Y_RNA.336-201ENST00000365307 109 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 Y_RNA.420-201ENST00000384043 110 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 CALM2P4-201ENST00000430810 426 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 AC114811.1-201ENST00000507207 168 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 AC096725.1-201ENST00000514266 313 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 SCARNA16.3-201ENST00000516595 184 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 RNU6-1116P-201ENST00000517269 99 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 MIR3124-201ENST00000582636 67 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 AL365205.2-201ENST00000594586 68 ntBASIC3.14□□□□□ -1.91
CCDC97Q96F63 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC97Q96F63 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC97Q96F63 RNU1-35P-201ENST00000362782 153 ntBASIC3.13□□□□□ -1.91
CCDC97Q96F63 SNORA20-201ENST00000384662 132 ntBASIC3.13□□□□□ -1.91
CCDC97Q96F63 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
CCDC97Q96F63 RNU6-693P-201ENST00000516134 107 ntBASIC3.13□□□□□ -1.91
CCDC97Q96F63 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC97Q96F63 AC006441.5-201ENST00000612680 209 ntBASIC3.13□□□□□ -1.91
CCDC97Q96F63 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms