Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Y_RNA.797-201ENST00000515977 94 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC022559.1-201ENST00000520905 205 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 MIR6840-201ENST00000611937 71 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
CTHRC1Q96CG8 RNU6-209P-201ENST00000384118 107 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 MIR616-201ENST00000385293 97 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 SNORA48.1-201ENST00000390879 135 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 RNU6-861P-201ENST00000516745 106 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 RNU2-56P-201ENST00000516826 190 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 AP002004.2-201ENST00000531656 154 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 MIR4744-201ENST00000581563 82 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 JPX_2.1-201ENST00000614161 69 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 U6.106-201ENST00000636360 105 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 AC068700.1-201ENST00000565862 3754 ntBASIC2.04□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.150-201ENST00000363562 102 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.572-201ENST00000384757 98 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 RNU6-1228P-201ENST00000391014 107 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 AL049830.1-201ENST00000468034 425 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 RNU6-1007P-201ENST00000516586 107 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 Y_RNA.714-201ENST00000517065 90 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
CTHRC1Q96CG8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 U8.2-201ENST00000363156 134 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 snoU2_19.4-201ENST00000364329 80 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.229-201ENST00000364347 113 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNU6-312P-201ENST00000364629 107 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNU6-1080P-201ENST00000383982 107 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNY3P5-201ENST00000384127 102 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNU6-886P-201ENST00000384319 105 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNU6-950P-201ENST00000384651 107 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AC245047.3-201ENST00000429428 127 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AC245047.8-201ENST00000456455 284 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 AL391903.3-201ENST00000612158 163 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CTHRC1Q96CG8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 RNU6-682P-201ENST00000363843 106 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 MIR548I3-201ENST00000408378 149 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 MIR548I1-201ENST00000408810 149 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 RNU2-7P-201ENST00000410794 178 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 HMGN1P7-201ENST00000491722 313 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 RPL23AP91-201ENST00000569211 455 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP432-201ENST00000362480 116 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.75-201ENST00000362927 97 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.180-201ENST00000363867 113 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.240-201ENST00000364469 95 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 MIR520A-201ENST00000384862 85 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 RNU6-578P-201ENST00000390980 103 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 AL606845.1-201ENST00000404881 255 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2□□□□□ -2.09
CTHRC1Q96CG8 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 AC022217.4-201ENST00000604389 163 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
CTHRC1Q96CG8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CTHRC1Q96CG8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CTHRC1Q96CG8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
CTHRC1Q96CG8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 SNORA1B-201ENST00000362535 133 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.265-201ENST00000364677 108 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 MT-TT-201ENST00000387460 66 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 RNA5SP109-201ENST00000391010 116 ntBASIC1.99□□□□□ -2.09
CTHRC1Q96CG8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms