Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 MTND5P32-201ENST00000560711 1802 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 SNORD58C-201ENST00000365223 64 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 SNORD61-201ENST00000384252 73 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RNU6-443P-201ENST00000384780 107 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.651-201ENST00000459380 103 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RPS26P45-201ENST00000471748 340 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 AC096725.1-201ENST00000514266 313 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RNU6-781P-201ENST00000516377 101 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RNU6-589P-201ENST00000516485 107 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 RNU6-504P-201ENST00000516568 104 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 MIR4435-1-201ENST00000582552 80 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 AC104984.5-201ENST00000586878 94 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 AL591926.4-201ENST00000616895 298 ntBASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
VTI1AQ96AJ9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 RNU1-131P-201ENST00000458943 161 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.666-201ENST00000516187 112 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 RNU1-142P-201ENST00000516682 145 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 RNU6-1270P-201ENST00000517128 108 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 AL022345.2-201ENST00000606307 135 ntBASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTI1AQ96AJ9 MIR126-201ENST00000362291 85 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 SNORA1B-201ENST00000362535 133 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 MIR548A2-201ENST00000384956 97 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 RNA5SP380-201ENST00000517190 98 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 CYCSP26-201ENST00000534107 320 ntBASIC3.34□□□□□ -1.87
VTI1AQ96AJ9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
VTI1AQ96AJ9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
VTI1AQ96AJ9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 RNU6-888P-201ENST00000363010 101 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 SNORA38-201ENST00000363946 132 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 RNU6-647P-201ENST00000364243 107 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 SNORA8-201ENST00000384574 139 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 MIR196B-201ENST00000384852 84 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 RNA5SP508-201ENST00000411327 119 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 AC087499.2-201ENST00000432861 149 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 AL358944.1-201ENST00000528537 144 ntBASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTI1AQ96AJ9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNU6-851P-201ENST00000384565 107 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNU6-160P-201ENST00000384591 107 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNA5SP323-201ENST00000391094 133 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNU11-5P-201ENST00000391216 129 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 AL163195.1-201ENST00000496941 348 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RN7SL636P-201ENST00000497504 294 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 RNA5SP236-201ENST00000516169 116 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 AC107016.2-201ENST00000547968 190 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 MIR6715A-201ENST00000615929 79 ntBASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.32□□□□□ -1.88
VTI1AQ96AJ9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 SNORD24-201ENST00000383884 75 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 MIR522-201ENST00000385071 87 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AF228730.3-201ENST00000436691 102 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AC009238.1-201ENST00000442165 424 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AC009237.6-201ENST00000446969 424 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 TRBV12-1-201ENST00000479785 344 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 IGKV1-22-201ENST00000524313 326 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AL670379.3-201ENST00000605040 251 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
VTI1AQ96AJ9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RNU6-862P-201ENST00000362804 105 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RNU6-1292P-201ENST00000383856 107 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 MIRLET7F2-201ENST00000385277 83 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 SNORA26.7-201ENST00000391288 122 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 AL049830.1-201ENST00000468034 425 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RN7SL20P-201ENST00000488827 297 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 RNA5SP385-201ENST00000515947 110 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 MIR3945-201ENST00000581853 98 ntBASIC3.3□□□□□ -1.88
VTI1AQ96AJ9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 RNA5SP493-201ENST00000364115 91 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 RNU6-755P-201ENST00000364400 103 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 SNORA22-201ENST00000383907 134 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 SNORD77.3-201ENST00000391113 65 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 FTH1P12-201ENST00000432137 551 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 AC099677.2-201ENST00000436385 175 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 AL109933.2-201ENST00000452651 260 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 CYCTP-201ENST00000504253 315 ntBASIC3.29□□□□□ -1.88
VTI1AQ96AJ9 RN7SKP19-201ENST00000516016 252 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms