Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 U2.5-201ENST00000619465 191 ntBASIC2.14□□□□□ -2.07
ATP2A3Q93084 U2.10-201ENST00000620268 191 ntBASIC2.14□□□□□ -2.07
ATP2A3Q93084 U2.22-201ENST00000636441 106 ntBASIC2.14□□□□□ -2.07
ATP2A3Q93084 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
ATP2A3Q93084 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATP2A3Q93084 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATP2A3Q93084 AL157777.2-201ENST00000258070 137 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 SNORA27.1-201ENST00000362604 124 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 snoU2-30.2-201ENST00000362805 70 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 RNU6-407P-201ENST00000365280 104 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ATP2A3Q93084 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 RPS27P22-201ENST00000478056 241 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 MRPS17P9-201ENST00000511924 393 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 RNU6-346P-201ENST00000516288 111 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 MIR514B-201ENST00000516774 80 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
ATP2A3Q93084 MRPS18CP4-201ENST00000535821 231 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 AL137100.2-201ENST00000555786 315 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
ATP2A3Q93084 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 AC104465.1-201ENST00000611365 139 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 U1.36-201ENST00000620684 176 ntBASIC2.13□□□□□ -2.07
ATP2A3Q93084 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATP2A3Q93084 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ATP2A3Q93084 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
ATP2A3Q93084 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ATP2A3Q93084 Y_RNA.164-201ENST00000363709 102 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 Y_RNA.262-201ENST00000364641 102 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 Y_RNA.310-201ENST00000365063 113 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 Y_RNA.435-201ENST00000384095 112 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNU6-746P-201ENST00000384112 109 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 SNORA72.4-201ENST00000384174 132 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 SNORD116-13-201ENST00000384408 92 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNA5SP212-201ENST00000391223 107 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNU2-2P-201ENST00000410396 191 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNU6-1135P-201ENST00000411083 103 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 AC010154.1-201ENST00000425857 269 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNU6-406P-201ENST00000516470 107 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.12□□□□□ -2.07
ATP2A3Q93084 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 MIR3169-201ENST00000578032 83 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 RNU2-4P-201ENST00000606190 192 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 U6.106-201ENST00000636360 105 ntBASIC2.12□□□□□ -2.07
ATP2A3Q93084 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.11□□□□□ -2.07
ATP2A3Q93084 Y_RNA.8-201ENST00000362353 102 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 snoU2_19.4-201ENST00000364329 80 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 Y_RNA.338-201ENST00000365320 114 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 MTCO2P33-201ENST00000402100 465 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.11□□□□□ -2.07
ATP2A3Q93084 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 RNA5SP20-201ENST00000515976 84 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 RNU6-1278P-201ENST00000516130 107 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 AC136628.3-201ENST00000521868 290 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 AL353149.1-201ENST00000610667 244 ntBASIC2.11□□□□□ -2.07
ATP2A3Q93084 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU6-818P-201ENST00000364837 108 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU6-1130P-201ENST00000365434 107 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 Y_RNA.368-201ENST00000365547 113 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 Y_RNA.398-201ENST00000383952 99 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 Y_RNA.412-201ENST00000384001 104 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU6-417P-201ENST00000384712 107 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 Y_RNA.571-201ENST00000384753 98 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU6-855P-201ENST00000410395 104 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU6-394P-201ENST00000410735 107 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RNU7-141P-201ENST00000459304 62 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 RPS26P55-201ENST00000471178 356 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 Y_RNA.662-201ENST00000516028 97 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 MIR4438-201ENST00000585271 93 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 AC005786.1-201ENST00000588553 154 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 AL078604.3-201ENST00000615580 211 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 AC013791.1-201ENST00000616619 62 ntBASIC2.1□□□□□ -2.07
ATP2A3Q93084 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
ATP2A3Q93084 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATP2A3Q93084 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 RNU6-381P-201ENST00000391259 108 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.09□□□□□ -2.07
ATP2A3Q93084 HMGN2P23-201ENST00000456759 269 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 AC010409.1-201ENST00000487382 476 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 RNVU1-2-201ENST00000516326 135 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 Y_RNA.703-201ENST00000516846 111 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 MIR3144-201ENST00000579460 79 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 MIR3910-1-201ENST00000580936 111 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 MIR338-201ENST00000636369 67 ntBASIC2.09□□□□□ -2.07
ATP2A3Q93084 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATP2A3Q93084 Y_RNA.287-201ENST00000364853 94 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms