Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 Y_RNA.464-201ENST00000384282 110 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AL023284.1-201ENST00000403956 276 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AC007064.1-201ENST00000412238 351 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 HMGN2P3-201ENST00000433603 273 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 HMGN2P5-201ENST00000436882 273 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AC245047.8-201ENST00000456455 284 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 TRBV12-1-201ENST00000479785 344 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 SCARNA8-201ENST00000515924 131 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATG4AQ8WYN0 SNORA3A-201ENST00000364113 130 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RNU6-275P-201ENST00000364910 107 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RNU6-578P-201ENST00000390980 103 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RNA5SP496-201ENST00000391240 109 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RN7SKP101-201ENST00000411376 320 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 RNU6-453P-201ENST00000516819 85 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 AL358944.1-201ENST00000528537 144 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 MIR2681-201ENST00000581814 105 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 AL021707.8-201ENST00000609428 183 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 AC108706.1-201ENST00000611053 297 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 MT-TT-201ENST00000387460 66 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 MIR1278-201ENST00000408753 81 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 AC233266.1-201ENST00000454518 96 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 AC242852.1-201ENST00000612151 96 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 AC244015.1-201ENST00000622301 99 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATG4AQ8WYN0 RNU6-312P-201ENST00000364629 107 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 RNY3P5-201ENST00000384127 102 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AC011753.1-201ENST00000451001 220 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 RNU6-1212P-201ENST00000517023 104 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 SNORA31.25-201ENST00000517242 134 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AP002004.2-201ENST00000531656 154 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AC109810.1-201ENST00000534066 224 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 MIR3945-201ENST00000581853 98 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
ATG4AQ8WYN0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 SNORA48.1-201ENST00000390879 135 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AL606845.1-201ENST00000404881 255 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AC069257.2-201ENST00000441819 155 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AC084364.2-201ENST00000546924 395 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 AC064859.1-201ENST00000624741 174 ntBASIC2.09□□□□□ -2.07
ATG4AQ8WYN0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
ATG4AQ8WYN0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
ATG4AQ8WYN0 SNORA1B-201ENST00000362535 133 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.441-201ENST00000384123 112 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 AL606517.2-201ENST00000442855 241 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 SNORD11-201ENST00000459124 84 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 AC005840.1-201ENST00000498412 377 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 RNVU1-2-201ENST00000516326 135 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 RPL23AP91-201ENST00000569211 455 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 MIR4529-201ENST00000578110 78 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 JPX_2.1-201ENST00000614161 69 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
ATG4AQ8WYN0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 AL603908.1-201ENST00000406098 201 ntBASIC2.07□□□□□ -2.08
ATG4AQ8WYN0 RNA5SP501-201ENST00000410990 112 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms