Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 AC073413.2-201ENST00000604332 360 ntBASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHKBP1Q8TBC3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 RNU1-96P-201ENST00000364163 162 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.265-201ENST00000364677 108 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 RPL32P35-201ENST00000415214 394 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP112-201ENST00000515937 99 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP395-201ENST00000516567 118 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 SUMO2P16-201ENST00000519475 264 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 AC004486.1-201ENST00000546846 233 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 MIR4319-201ENST00000577285 85 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 MIR3162-201ENST00000581818 82 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 AC021443.1-201ENST00000604478 211 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 U2.20-201ENST00000613956 192 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 MIR1248-201ENST00000629190 106 ntBASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHKBP1Q8TBC3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 MIR449A-201ENST00000362113 91 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 SNORA63D-201ENST00000364359 132 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP225-201ENST00000410874 135 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 AC108938.1-201ENST00000451204 136 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 AP004217.1-201ENST00000480579 346 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 AC087685.1-201ENST00000587507 141 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 AL162726.3-218ENST00000636401 95 ntBASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHKBP1Q8TBC3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.17-201ENST00000362433 111 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 SNORA2.2-201ENST00000365473 135 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-1124P-201ENST00000384169 107 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AL445687.1-201ENST00000439946 251 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC233266.1-201ENST00000454518 96 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-586P-201ENST00000517265 104 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC079600.2-201ENST00000550076 130 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC242852.1-201ENST00000612151 96 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 AC244015.1-201ENST00000622301 99 ntBASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.04□□□□□ -1.92
SHKBP1Q8TBC3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 MIR1253-201ENST00000408273 105 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP57-201ENST00000459463 123 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNU7-123P-201ENST00000515911 60 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-1291P-201ENST00000516591 104 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-965P-201ENST00000516721 96 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNU6-856P-201ENST00000516959 98 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNA5SP490-201ENST00000517141 136 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RNU7-128P-201ENST00000517247 62 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 AC022523.2-201ENST00000561045 150 ntBASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SHKBP1Q8TBC3 ZNF271P-202ENST00000465539 1970 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 RNU6-813P-201ENST00000384691 107 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 U8.17-201ENST00000391292 132 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 RNA5SP184-201ENST00000411071 108 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 AC087499.2-201ENST00000432861 149 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 RPL39P25-201ENST00000449384 154 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 RNU7-164P-201ENST00000459221 62 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 SCARNA23-201ENST00000516060 130 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 DEFB131E-201ENST00000532329 154 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 MIR3163-201ENST00000581592 73 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SHKBP1Q8TBC3 MIR126-201ENST00000362291 85 ntBASIC3.01□□□□□ -1.93
SHKBP1Q8TBC3 RNY3P2-201ENST00000362918 102 ntBASIC3.01□□□□□ -1.93
SHKBP1Q8TBC3 Y_RNA.290-201ENST00000364879 114 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms