Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU4-28P-201ENST00000364739 141 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 BX295541.1-201ENST00000417774 250 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC007283.2-201ENST00000424739 197 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 SNORA19.2-201ENST00000516013 114 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 SCARNA17-201ENST00000516183 144 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU7-116P-201ENST00000516940 62 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MTND2P38-201ENST00000522536 667 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC023157.2-201ENST00000540596 141 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC138869.1-201ENST00000568623 124 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MTATP6P24-201ENST00000576835 677 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AL390123.1-201ENST00000603216 237 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AL392103.1-201ENST00000447000 198 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU7-149P-201ENST00000516739 59 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC069113.3-201ENST00000521019 150 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC008536.2-201ENST00000607284 349 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR4791-201ENST00000607666 84 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR520F-201ENST00000384824 87 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 USP9YP12-201ENST00000450481 570 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU7-125P-201ENST00000458760 62 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC091959.1-201ENST00000495857 238 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 UBL5P4-201ENST00000562584 236 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 ELOCP21-201ENST00000412558 336 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MTCO1P19-201ENST00000443487 500 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 SNORD45.4-201ENST00000516629 73 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU6-759P-201ENST00000516740 103 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC090616.2-202ENST00000584248 222 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AP000753.3-201ENST00000604083 169 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR548AZ-201ENST00000616567 95 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Z97988.1-201ENST00000637697 135 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR103A1-201ENST00000362165 78 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 SNORA18.4-201ENST00000516440 124 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR5188-201ENST00000583467 113 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 AL008636.1-201ENST00000625038 1018 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MTCO3P8-201ENST00000453691 755 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU7-175P-201ENST00000515915 61 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 RNU1-117P-201ENST00000517041 158 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR3915-201ENST00000578518 97 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 FTX_2.1-201ENST00000618816 94 ntBASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
SYNE1Q8NF91 MIR518A1-201ENST00000385068 85 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 RNU2-9P-201ENST00000410194 145 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 MLLT10P1-201ENST00000418346 262 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 MTCYBP8-201ENST00000422855 651 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 MTND4P19-201ENST00000446659 478 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 RNU6-261P-201ENST00000459506 102 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 RNU2-13P-201ENST00000515909 113 ntBASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.03□□□□□ -2.42
SYNE1Q8NF91 SNORD115-8-201ENST00000363856 82 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORD115-38-201ENST00000365037 82 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORD14.1-201ENST00000365609 90 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-131P-201ENST00000391144 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORA26.5-201ENST00000391215 123 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-510P-201ENST00000391239 108 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORD71-201ENST00000411292 86 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU7-156P-201ENST00000517214 74 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 MIR4762-201ENST00000585261 75 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 JPX_2.1-201ENST00000614161 69 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 AC092794.2-201ENST00000620933 563 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORA67.2-201ENST00000384300 149 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 EIF1P2-201ENST00000428233 350 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 USP9YP16-201ENST00000430287 407 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 USP9YP23-201ENST00000455085 407 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-848P-201ENST00000515948 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-617P-201ENST00000516147 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-473P-201ENST00000516164 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 AC007684.1-201ENST00000609671 477 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 AC005609.4-201ENST00000625071 447 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-522P-201ENST00000364497 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 SNORA72-201ENST00000384339 132 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNA5SP300-201ENST00000391197 107 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 AL139396.1-201ENST00000421137 167 ntBASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.04□□□□□ -2.42
SYNE1Q8NF91 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms