Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC107027.2-201ENST00000512197 115 ntBASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 SNORD45.4-201ENST00000516629 73 ntBASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 RNA5SP168-201ENST00000516642 112 ntBASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 MIR3944-201ENST00000581277 108 ntBASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLRN3Q8NCR9 MIRLET7C-201ENST00000362160 84 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 SNORD50B-201ENST00000364995 70 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 RNU6-484P-201ENST00000384016 107 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 Y_RNA.464-201ENST00000384282 110 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 MIR891A-201ENST00000401237 79 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 RNU6-1135P-201ENST00000411083 103 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 CALM2P4-201ENST00000430810 426 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 SEPT7P4-201ENST00000437076 306 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 RNU6-197P-201ENST00000516680 100 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 MIR4444-1-201ENST00000581696 74 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 MIR4444-2-201ENST00000584390 74 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 MIR7975-201ENST00000619350 68 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 MIR622-201ENST00000638396 96 ntBASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CLRN3Q8NCR9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 MIR424-201ENST00000362227 98 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNU6-833P-201ENST00000363486 107 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 MIR23B-201ENST00000384832 97 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 MIR183-201ENST00000384958 110 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 MIR34B-201ENST00000385076 84 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 U8.16-201ENST00000391279 133 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 AC074198.2-201ENST00000508153 258 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNU6-561P-201ENST00000516222 102 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 RNU6-365P-201ENST00000517113 106 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 AC012314.7-201ENST00000619693 93 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 U6.105-201ENST00000637379 88 ntBASIC2.14□□□□□ -2.07
CLRN3Q8NCR9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 SNORA9.2-201ENST00000365361 133 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 MIR660-201ENST00000385235 97 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 MIR670-201ENST00000390142 98 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 SNORD72-201ENST00000390994 80 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 AC114811.1-201ENST00000507207 168 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 RNU7-12P-201ENST00000516030 62 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 MIR1254-2-201ENST00000579553 63 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 MIR4429-201ENST00000580105 73 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 AC097639.2-201ENST00000603159 172 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
CLRN3Q8NCR9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 RNU4-84P-201ENST00000364200 139 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 SNORA7.4-201ENST00000384249 137 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 RNU6-239P-201ENST00000390990 99 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 SNORD3E-202ENST00000627253 216 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 MIR3651-201ENST00000630427 90 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CLRN3Q8NCR9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 MIR22-201ENST00000362190 85 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 SNORA38.1-201ENST00000364172 131 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 Y_RNA.634-201ENST00000364811 113 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 RNA5SP267-201ENST00000364893 126 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 MIR490-201ENST00000384865 128 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 AC006461.1-201ENST00000412637 326 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 JTBP1-201ENST00000441314 247 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLRN3Q8NCR9 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 Y_RNA.272-201ENST00000364696 102 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 MIR1267-201ENST00000408723 78 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 RNA5SP120-201ENST00000410900 112 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 RNU6-504P-201ENST00000516568 104 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 RNU6-1212P-201ENST00000517023 104 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 MIR5680-201ENST00000577577 84 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 MIR5092-201ENST00000583139 88 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLRN3Q8NCR9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CLRN3Q8NCR9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms