Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC105313.1-201ENST00000509121 353 ntBASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 SNORA40.9-201ENST00000515895 93 ntBASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 AC055872.1-201ENST00000570978 278 ntBASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 AC091925.1-201ENST00000623204 462 ntBASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.18□□□□□ -2.38
ZIC4Q8N9L1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 RNU6-1090P-201ENST00000364065 94 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD116-9-201ENST00000384000 95 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD116-3-201ENST00000384287 95 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD116-7-201ENST00000384404 95 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD116-5-201ENST00000384462 95 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD28B-201ENST00000390993 75 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNRPGP10-201ENST00000432323 225 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 RNU6-329P-201ENST00000459618 107 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 AC018638.8-201ENST00000588755 281 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 AC015726.2-201ENST00000620112 122 ntBASIC0.17□□□□□ -2.38
ZIC4Q8N9L1 SNORD50B-201ENST00000364995 70 ntBASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 MTCO3P10-201ENST00000455912 772 ntBASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 RNU6-566P-201ENST00000516790 107 ntBASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 RNU6-1314P-201ENST00000517139 104 ntBASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.16□□□□□ -2.38
ZIC4Q8N9L1 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.301-201ENST00000364990 103 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6-1013P-201ENST00000384180 107 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.473-201ENST00000384333 102 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6-131P-201ENST00000391144 107 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 MTCO2P27-201ENST00000420740 428 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 snoU13.21-201ENST00000459368 105 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 AC011352.1-201ENST00000512300 793 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 AC026782.1-201ENST00000512952 449 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6-1012P-201ENST00000516606 109 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 RNU6-273P-201ENST00000516937 96 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 MTND3P12-201ENST00000559068 328 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 AL355375.2-201ENST00000574825 175 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 MIR548AR-201ENST00000582191 57 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 AC060780.3-201ENST00000589464 80 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 MIR8087-201ENST00000612745 78 ntBASIC0.15□□□□□ -2.39
ZIC4Q8N9L1 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.41-201ENST00000362646 102 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU6-1301P-201ENST00000362724 104 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.51-201ENST00000362725 102 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 SNORD45.3-201ENST00000363836 72 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU6-580P-201ENST00000365159 107 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU6-396P-201ENST00000365369 105 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU2-16P-201ENST00000410712 136 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU2-61P-201ENST00000411069 191 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 RNU6-373P-201ENST00000411247 98 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.688-201ENST00000516565 95 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AC012433.1-201ENST00000588916 398 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AC018462.2-201ENST00000605375 395 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 MIR6128-201ENST00000615528 109 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 AC092634.7-201ENST00000621022 103 ntBASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.14□□□□□ -2.39
ZIC4Q8N9L1 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 RNU6-961P-201ENST00000363893 105 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 MIR520H-201ENST00000385126 88 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AL031003.1-201ENST00000404229 172 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 RNU6-1199P-201ENST00000411249 104 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AC009161.1-201ENST00000417306 376 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 SNRPGP14-201ENST00000435400 219 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 MTND1P1-201ENST00000445453 368 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 NDUFA4P2-201ENST00000489989 244 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 MTND5P5-201ENST00000503764 376 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AC116353.2-201ENST00000505332 712 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 RNU6-966P-201ENST00000516479 104 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AC006380.1-201ENST00000603598 186 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 MIR6779-201ENST00000617283 64 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AC022079.1-201ENST00000621546 602 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 AP000770.2-201ENST00000623694 100 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 MIR3662-201ENST00000637030 95 ntBASIC0.13□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.101-201ENST00000363154 102 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.148-201ENST00000363557 117 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.368-201ENST00000365547 113 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 RNU6-716P-201ENST00000365621 103 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 SNORD116-1-201ENST00000384335 95 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 SNORD38C-201ENST00000384381 69 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 MIR520F-201ENST00000384824 87 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 SNORD12B-201ENST00000410433 91 ntBASIC0.12□□□□□ -2.39
ZIC4Q8N9L1 RNA5SP127-201ENST00000411051 133 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms