Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
VRK3Q8IV63 RNU2-48P-201ENST00000410694 191 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 RNU2-70P-201ENST00000410718 179 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 MLLT10P1-201ENST00000418346 262 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 AC023449.1-201ENST00000454464 154 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 RNU6-856P-201ENST00000516959 98 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 AC011604.1-201ENST00000545978 196 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 MIR4662B-201ENST00000579498 81 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.37□□□□□ -2.03
VRK3Q8IV63 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
VRK3Q8IV63 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VRK3Q8IV63 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
VRK3Q8IV63 ZNF271P-202ENST00000465539 1970 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 MIR21-201ENST00000362134 72 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 RNU6-546P-201ENST00000383991 107 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 Y_RNA.486-201ENST00000384398 107 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 MIR624-201ENST00000385217 97 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 MIRLET7F2-201ENST00000385277 83 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 SNORA26-201ENST00000391286 122 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 RNU2-32P-201ENST00000411193 191 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AC123900.1-201ENST00000420390 96 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AC063976.4-201ENST00000421971 163 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.36□□□□□ -2.03
VRK3Q8IV63 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 RNU6-965P-201ENST00000516721 96 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AC105245.1-201ENST00000581934 244 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AC091178.2-201ENST00000584401 117 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.36□□□□□ -2.03
VRK3Q8IV63 MIR7515-201ENST00000637837 67 ntBASIC2.36□□□□□ -2.03
VRK3Q8IV63 AL391516.1-201ENST00000554380 2449 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 Y_RNA.66-201ENST00000362862 102 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 DEFA7P-201ENST00000382676 285 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 MIR891A-201ENST00000401237 79 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 Y_RNA.630-201ENST00000411370 108 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.35□□□□□ -2.03
VRK3Q8IV63 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.35□□□□□ -2.03
VRK3Q8IV63 AC104389.3-201ENST00000445629 235 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 RPS26P45-201ENST00000471748 340 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 OR9P1P-201ENST00000496431 281 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 RNU7-149P-201ENST00000516739 59 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 AC007751.1-201ENST00000529260 376 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 AL365205.2-201ENST00000594586 68 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 Pinc.1-201ENST00000616452 154 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 MIR5739-201ENST00000619803 80 ntBASIC2.35□□□□□ -2.03
VRK3Q8IV63 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VRK3Q8IV63 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VRK3Q8IV63 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VRK3Q8IV63 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
VRK3Q8IV63 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VRK3Q8IV63 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 RNU6-647P-201ENST00000364243 107 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 RNU6-1164P-201ENST00000364428 107 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 RNU6-309P-201ENST00000364573 106 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VRK3Q8IV63 AL513477.1-202ENST00000417061 214 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 AL161788.1-201ENST00000441805 169 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.34□□□□□ -2.03
VRK3Q8IV63 RNU5E-3P-201ENST00000515913 68 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 SNORD33.1-201ENST00000516213 88 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 Y_RNA.690-201ENST00000516603 95 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 NDUFA5P6-201ENST00000542110 379 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 MIR3613-201ENST00000579844 87 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 AL356280.1-201ENST00000603614 379 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 AC108081.1-201ENST00000604358 221 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 AC103810.6-201ENST00000606708 136 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
VRK3Q8IV63 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
VRK3Q8IV63 SNORD58C-201ENST00000365223 64 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 SNORA22-201ENST00000383907 134 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 MIR218-1-201ENST00000384999 110 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 MIR520G-201ENST00000385064 90 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 AC060773.1-201ENST00000421698 310 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.33□□□□□ -2.04
VRK3Q8IV63 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 NDUFA4P2-201ENST00000489989 244 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 AC234781.5-201ENST00000508429 271 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 SNORA48.11-201ENST00000517015 89 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 RNU6-1096P-201ENST00000517089 102 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 RNU7-128P-201ENST00000517247 62 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 MTND5P34-201ENST00000568888 325 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
VRK3Q8IV63 MTND5P32-201ENST00000560711 1802 ntBASIC2.33□□□□□ -2.04
VRK3Q8IV63 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VRK3Q8IV63 Y_RNA.52-201ENST00000362760 96 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RNU6-508P-201ENST00000363231 103 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RNU1-23P-201ENST00000363361 144 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 SNORD18B-201ENST00000365659 72 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RNU6-1292P-201ENST00000383856 107 ntBASIC2.32□□□□□ -2.04
VRK3Q8IV63 RNA5SP127-201ENST00000411051 133 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms