Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR6079-201ENST00000635807 62 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.361-201ENST00000365515 120 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.439-201ENST00000384119 94 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 RNU6-376P-201ENST00000384731 106 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 SNORA12.1-201ENST00000390873 148 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AL591704.2-201ENST00000421658 181 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AL135790.2-201ENST00000437701 267 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 U8.20-201ENST00000459445 131 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AC010655.3-201ENST00000478818 450 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AC099513.1-201ENST00000490423 301 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 RNU6-475P-201ENST00000516073 104 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 RNU6-1337P-201ENST00000516525 95 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.43□□□□□ -2.18
NPHP3Q7Z494 RPL21P9-201ENST00000556149 474 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AC124312.5-201ENST00000604451 268 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
NPHP3Q7Z494 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.43□□□□□ -2.18
NPHP3Q7Z494 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
NPHP3Q7Z494 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU4-50P-201ENST00000364361 141 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.267-201ENST00000364679 109 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNY1P4-201ENST00000384595 115 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU4-30P-201ENST00000410245 143 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNA5SP511-201ENST00000410487 115 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 AL354751.2-201ENST00000415471 210 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU6-397P-201ENST00000516226 104 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU6-1046P-201ENST00000516538 107 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU6-1291P-201ENST00000516591 104 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.711-201ENST00000516993 102 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 RNU6-988P-201ENST00000519081 107 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 MIR4423-201ENST00000580922 80 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 AC091178.2-201ENST00000584401 117 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 AC021506.2-201ENST00000612354 169 ntBASIC1.42□□□□□ -2.18
NPHP3Q7Z494 SNORD33-201ENST00000362761 85 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.329-201ENST00000365209 107 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.331-201ENST00000365267 102 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 SNORD116-13-201ENST00000384408 92 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 RNU6-1031P-201ENST00000384773 107 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 MIR194-1-201ENST00000384892 85 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 MIR532-201ENST00000385025 91 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 MIR216A-201ENST00000385063 110 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 RNU6-823P-201ENST00000391042 103 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 RN7SKP179-201ENST00000516126 217 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 RNU7-110P-201ENST00000516891 62 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 AC136932.1-201ENST00000574771 208 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.41□□□□□ -2.18
NPHP3Q7Z494 MIR6857-201ENST00000613267 93 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.41□□□□□ -2.18
NPHP3Q7Z494 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.41□□□□□ -2.18
NPHP3Q7Z494 SNORD81.1-201ENST00000363064 77 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.389-201ENST00000383924 113 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.526-201ENST00000384572 110 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RN7SKP200-201ENST00000410564 320 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RNU5A-5P-201ENST00000411054 116 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RNU2-61P-201ENST00000411069 191 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC027119.1-201ENST00000440877 241 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.4□□□□□ -2.18
NPHP3Q7Z494 SUMO1P2-201ENST00000452524 304 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC233266.1-201ENST00000454518 96 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RNU6-1132P-201ENST00000459214 107 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RNU7-94P-201ENST00000459576 63 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 RNU6-1278P-201ENST00000516130 107 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC015688.6-201ENST00000577737 104 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 MIR3973-201ENST00000579824 107 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 SNORD114-21-201ENST00000606412 72 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC242852.1-201ENST00000612151 96 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC040896.1-201ENST00000613819 479 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 AC244015.1-201ENST00000622301 99 ntBASIC1.4□□□□□ -2.18
NPHP3Q7Z494 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NPHP3Q7Z494 SNORD114-7-201ENST00000362520 77 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 RNU4-38P-201ENST00000364472 129 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.286-201ENST00000364813 102 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.462-201ENST00000384268 102 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 AC005534.2-201ENST00000431047 433 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 STAG3L5P-204ENST00000443759 179 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 AC005042.3-201ENST00000453230 174 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.715-201ENST00000517082 110 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 RAC1P9-201ENST00000604990 392 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 AC011373.1-201ENST00000607270 237 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 AL078604.3-201ENST00000615580 211 ntBASIC1.4□□□□□ -2.19
NPHP3Q7Z494 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NPHP3Q7Z494 SNORA1B-201ENST00000362535 133 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.527-201ENST00000384573 102 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 Y_RNA.551-201ENST00000384661 102 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-101P-201ENST00000410323 104 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 SNORA70.12-201ENST00000516084 153 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-341P-201ENST00000516973 96 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-1137P-201ENST00000517073 99 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 RNU6-1096P-201ENST00000517089 102 ntBASIC1.39□□□□□ -2.19
NPHP3Q7Z494 AC022616.4-201ENST00000522985 181 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms