Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 RNU4-82P-201ENST00000362443 140 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 RNY1-201ENST00000364228 113 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 RNU4-10P-201ENST00000364383 140 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 RNU6-437P-201ENST00000459408 95 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.71□□□□□ -2.14
SHFQ7M4L6 RNU4-71P-201ENST00000516258 113 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 MIR4672-201ENST00000583126 81 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
SHFQ7M4L6 SCARNA15.3-201ENST00000626315 122 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 SCARNA4.1-201ENST00000628597 123 ntBASIC1.71□□□□□ -2.14
SHFQ7M4L6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHFQ7M4L6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SHFQ7M4L6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SHFQ7M4L6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 RNY4P28-201ENST00000365281 93 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 RNU6-144P-201ENST00000383951 107 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 snoU13.27-201ENST00000459278 104 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 RNU2-56P-201ENST00000516826 190 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 AL365265.1-201ENST00000621045 234 ntBASIC1.7□□□□□ -2.14
SHFQ7M4L6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.7□□□□□ -2.14
SHFQ7M4L6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 RNU6-674P-201ENST00000363831 107 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 RNU2-2P-201ENST00000410396 191 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 RNU6-383P-201ENST00000410864 94 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 Z98742.3-201ENST00000418637 326 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 AL049830.1-201ENST00000468034 425 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 AC100767.1-201ENST00000528178 123 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 MIR3671-201ENST00000580455 88 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 AC009779.6-201ENST00000603972 165 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 AL590808.1-201ENST00000618696 141 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 AC141273.2-201ENST00000618989 130 ntBASIC1.69□□□□□ -2.14
SHFQ7M4L6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.69□□□□□ -2.14
SHFQ7M4L6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHFQ7M4L6 RNU6-653P-201ENST00000363074 106 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 SNORA16.1-201ENST00000364597 132 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 MIR1278-201ENST00000408753 81 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 RN7SKP200-201ENST00000410564 320 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 Y_RNA.626-201ENST00000411288 95 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 Z98949.2-201ENST00000440996 144 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 STAG3L5P-204ENST00000443759 179 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 RPL23AP6-201ENST00000446637 472 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 AC091544.4-201ENST00000555268 342 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 AL591926.4-201ENST00000616895 298 ntBASIC1.68□□□□□ -2.14
SHFQ7M4L6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHFQ7M4L6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNU6-439P-201ENST00000384188 106 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.552-201ENST00000384665 112 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.572-201ENST00000384757 98 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 MIR526A2-201ENST00000390198 65 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNU6-360P-201ENST00000390944 104 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 MIR1298-201ENST00000408783 112 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 RN7SKP223-201ENST00000410582 62 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 COX6CP10-201ENST00000416832 224 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNU7-34P-201ENST00000459394 64 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 COX6CP14-201ENST00000469580 174 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 AC099513.1-201ENST00000490423 301 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 OR9P1P-201ENST00000496431 281 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 RNY3P16-201ENST00000516338 101 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 MIR4709-201ENST00000577272 72 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 AC130289.1-201ENST00000577321 73 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 AC064859.1-201ENST00000624741 174 ntBASIC1.67□□□□□ -2.14
SHFQ7M4L6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SHFQ7M4L6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 Y_RNA.257-201ENST00000364596 102 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 MIR626-201ENST00000385032 94 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
SHFQ7M4L6 HMGN1P7-201ENST00000491722 313 ntBASIC1.66□□□□□ -2.14
SHFQ7M4L6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.66□□□□□ -2.14
SHFQ7M4L6 AC107393.1-201ENST00000512403 346 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms