Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 snoU2-30.1-201ENST00000365012 70 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 AC117470.1-201ENST00000381974 330 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 RNU6-131P-201ENST00000391144 107 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
NIPAL3Q6P499 HMGN2P32-201ENST00000444648 269 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 RNU6-559P-201ENST00000516151 98 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 RNU6-436P-201ENST00000516171 114 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 SNORA18.7-201ENST00000516910 131 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 AC113139.1-201ENST00000605049 239 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 AC022306.2-201ENST00000617563 647 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
NIPAL3Q6P499 SNORA72-201ENST00000384339 132 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 MIR1276-201ENST00000408707 83 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 RNU6-1199P-201ENST00000411249 104 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 AL390729.2-201ENST00000416137 156 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 MTND1P2-201ENST00000430604 821 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 AC099799.1-201ENST00000439809 192 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 MTCO3P10-201ENST00000455912 772 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 RNU6-911P-201ENST00000516523 104 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 AC025253.1-201ENST00000613623 543 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 SEPT14P17-201ENST00000617978 177 ntBASIC0.74□□□□□ -2.29
NIPAL3Q6P499 SNORA25.3-201ENST00000363205 127 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 RNA5SP48-201ENST00000363969 126 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 RNU6-710P-201ENST00000410424 105 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 SNRPGP10-201ENST00000432323 225 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 RNU7-43P-201ENST00000516554 64 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 MIR4764-201ENST00000580680 88 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 AC136443.5-201ENST00000603741 370 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.73□□□□□ -2.29
NIPAL3Q6P499 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.73□□□□□ -2.29
NIPAL3Q6P499 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.27-201ENST00000362540 103 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 RNU6-490P-201ENST00000362985 107 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 RNU1-93P-201ENST00000364704 169 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 RNU6-1297P-201ENST00000384415 104 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 RNU6-855P-201ENST00000410395 104 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.599-201ENST00000410489 109 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 RN7SKP295-201ENST00000517264 153 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 AC023827.1-201ENST00000569247 97 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 AC022441.3-201ENST00000605737 136 ntBASIC0.72□□□□□ -2.29
NIPAL3Q6P499 Y_RNA.146-201ENST00000363549 102 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 SNORA25.9-201ENST00000365087 128 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.329-201ENST00000365209 107 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 MCFD2P1-201ENST00000417812 300 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 AP003716.2-201ENST00000528260 108 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
NIPAL3Q6P499 AC131055.1-201ENST00000584626 316 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 U6.92-201ENST00000636464 89 ntBASIC0.71□□□□□ -2.3
NIPAL3Q6P499 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.259-201ENST00000364619 101 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 SNORD50B-201ENST00000364995 70 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 RNU6-1175P-201ENST00000365200 107 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.474-201ENST00000384341 102 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 MIR1185-1-201ENST00000408598 86 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.619-201ENST00000410951 90 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 AC096644.2-201ENST00000429278 159 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 AC005042.3-201ENST00000453230 174 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 SNORD123-201ENST00000459473 70 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 RNU6-966P-201ENST00000516479 104 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 AC109810.1-201ENST00000534066 224 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.191-201ENST00000363972 113 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 RNU6-708P-201ENST00000384217 107 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AC098614.3-201ENST00000438957 440 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 RNU7-116P-201ENST00000516940 62 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.69□□□□□ -2.3
NIPAL3Q6P499 VN1R91P-201ENST00000594377 169 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 AC138305.3-201ENST00000624988 240 ntBASIC0.69□□□□□ -2.3
NIPAL3Q6P499 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
NIPAL3Q6P499 SNORD14E-201ENST00000364009 85 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.341-201ENST00000365341 102 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 RNU6-1323P-201ENST00000384025 107 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 MIR559-201ENST00000385188 96 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 RNU6-699P-201ENST00000517081 110 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 AC006600.1-201ENST00000572529 153 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 RBM11P1-201ENST00000604951 799 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 AC007742.2-201ENST00000618226 398 ntBASIC0.68□□□□□ -2.3
NIPAL3Q6P499 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.368-201ENST00000365547 113 ntBASIC0.67□□□□□ -2.3
NIPAL3Q6P499 Y_RNA.387-201ENST00000383918 102 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms