Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 U4.3-201ENST00000621047 82 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 AC244015.1-201ENST00000622301 99 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.634-201ENST00000364811 113 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 MIR27B-201ENST00000385129 97 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 RN7SKP223-201ENST00000410582 62 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 RNU2-48P-201ENST00000410694 191 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.676-201ENST00000516393 96 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 MIR4648-201ENST00000580107 72 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 MIR4635-201ENST00000583759 79 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 AL359075.3-201ENST00000613288 217 ntBASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF40BQ6NWY9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 MIR340-201ENST00000362125 95 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 MIR627-201ENST00000384979 97 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 MIR764-201ENST00000390811 85 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 RNA5SP323-201ENST00000391094 133 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 AL445687.1-201ENST00000439946 251 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 RNU7-99P-201ENST00000516271 62 ntBASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PRPF40BQ6NWY9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 RNA5SP125-201ENST00000364843 120 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 SNORD18B-201ENST00000365659 72 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 MIR562-201ENST00000384894 95 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 SRIP3-201ENST00000413200 219 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 EDDM3CP-201ENST00000415977 425 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 RPL39P40-201ENST00000445481 146 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 AC090049.2-201ENST00000550377 109 ntBASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF40BQ6NWY9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-215P-201ENST00000365169 102 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 SNORA25B-201ENST00000365507 128 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 MIR1289-2-201ENST00000408360 111 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-659P-201ENST00000516454 104 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.692-201ENST00000516627 105 ntBASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.17□□□□□ -1.9
PRPF40BQ6NWY9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 U8.1-201ENST00000362843 134 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU1-96P-201ENST00000364163 162 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-1056P-201ENST00000383996 107 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNA5SP210-201ENST00000391034 120 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 AL353689.1-201ENST00000438895 199 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU7-107P-201ENST00000459121 61 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 AC018868.1-201ENST00000491307 315 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 HMGN1P7-201ENST00000491722 313 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RN7SL636P-201ENST00000497504 294 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 SNORA18.4-201ENST00000516440 124 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU1-142P-201ENST00000516682 145 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-365P-201ENST00000517113 106 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 AC131055.1-201ENST00000584626 316 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 AC097639.2-201ENST00000603159 172 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 U4atac.1-201ENST00000618345 95 ntBASIC3.16□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-235P-201ENST00000362644 107 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-160P-201ENST00000384591 107 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 RNA5SP467-201ENST00000391274 118 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 SNRPGP10-201ENST00000432323 225 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 AC009238.1-201ENST00000442165 424 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 Z96811.1-201ENST00000445880 108 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 AC009237.6-201ENST00000446969 424 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-919P-201ENST00000516731 104 ntBASIC3.15□□□□□ -1.91
PRPF40BQ6NWY9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-834P-201ENST00000362367 110 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 RNU6-1325P-201ENST00000364905 105 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 AL035461.1-201ENST00000421490 332 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 AL591806.2-201ENST00000433122 173 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 MIR6079-201ENST00000635807 62 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 MIR338-201ENST00000636369 67 ntBASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PRPF40BQ6NWY9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.13□□□□□ -1.91
PRPF40BQ6NWY9 AC018630.2-201ENST00000534866 2403 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms