Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR4282-201ENST00000583613 67 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF220Q5VTB9 AL591926.4-201ENST00000616895 298 ntBASIC1.99□□□□□ -2.09
RNF220Q5VTB9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF220Q5VTB9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.122-201ENST00000363331 96 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.253-201ENST00000364562 112 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.307-201ENST00000365022 117 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.447-201ENST00000384184 113 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.477-201ENST00000384352 108 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 SNORA12.1-201ENST00000390873 148 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 RPL30P13-201ENST00000418873 348 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 SNORD2.1-201ENST00000458762 69 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.673-201ENST00000516306 88 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 MIR4643-201ENST00000577473 78 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 MIR3128-201ENST00000581957 66 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 AL513423.1-201ENST00000621695 132 ntBASIC1.98□□□□□ -2.09
RNF220Q5VTB9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF220Q5VTB9 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 SNORD68-201ENST00000363214 84 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 SNORD27-201ENST00000363981 72 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 RNU4-53P-201ENST00000410828 140 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 RNU6-651P-201ENST00000411040 105 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.97□□□□□ -2.09
RNF220Q5VTB9 PGBD4P5-201ENST00000445958 426 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 MTND1P19-201ENST00000511780 315 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.97□□□□□ -2.09
RNF220Q5VTB9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF220Q5VTB9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 SNORA20.1-201ENST00000364790 130 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 AC004965.1-201ENST00000413033 213 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 SNRPGP10-201ENST00000432323 225 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.96□□□□□ -2.1
RNF220Q5VTB9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.96□□□□□ -2.1
RNF220Q5VTB9 RNA5SP168-201ENST00000516642 112 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.96□□□□□ -2.1
RNF220Q5VTB9 SNORA77B-201ENST00000578179 125 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 MIR5688-201ENST00000580619 83 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 JPX_2.1-201ENST00000614161 69 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
RNF220Q5VTB9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
RNF220Q5VTB9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MIR424-201ENST00000362227 98 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 U8.5-201ENST00000364528 136 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 RNU6-424P-201ENST00000384367 105 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 AL161935.2-201ENST00000414627 60 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MLLT10P1-201ENST00000418346 262 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MIR4724-201ENST00000579485 89 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 MIR4762-201ENST00000585261 75 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
RNF220Q5VTB9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RNF220Q5VTB9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RNF220Q5VTB9 RNU6-1209P-201ENST00000363655 107 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 U8.16-201ENST00000391279 133 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 CALM2P4-201ENST00000430810 426 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 snoU13.9-201ENST00000458927 103 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.680-201ENST00000516441 93 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 AP000942.4-201ENST00000604811 241 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 SNORD3E-202ENST00000627253 216 ntBASIC1.94□□□□□ -2.1
RNF220Q5VTB9 MIRLET7C-201ENST00000362160 84 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 MIR367-201ENST00000362299 68 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.796-201ENST00000364268 102 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.799-201ENST00000364992 102 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 RNU6-969P-201ENST00000383900 105 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 SNORA8.3-201ENST00000384679 139 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 MIR522-201ENST00000385071 87 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 MIR526A2-201ENST00000390198 65 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 RNU6-131P-201ENST00000391144 107 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 SNORD58.1-201ENST00000391313 66 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 AC006006.1-201ENST00000603082 144 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 AL442067.1-201ENST00000613261 223 ntBASIC1.93□□□□□ -2.1
RNF220Q5VTB9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RNF220Q5VTB9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
RNF220Q5VTB9 AC068700.1-201ENST00000565862 3754 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 MIR449A-201ENST00000362113 91 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 Y_RNA.76-201ENST00000362931 109 ntBASIC1.92□□□□□ -2.1
RNF220Q5VTB9 MIR660-201ENST00000385235 97 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms