Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNA5SP201-201ENST00000410316 124 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AL158050.1-201ENST00000416077 457 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AC104563.1-201ENST00000476147 376 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RPL7P42-201ENST00000481005 679 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RPL39P36-201ENST00000490784 156 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RNU6-341P-201ENST00000516973 96 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RNU7-172P-201ENST00000517125 64 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 U6.114-201ENST00000636407 96 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RNU6-552P-201ENST00000362869 119 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 MT-TM-201ENST00000387377 68 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 MTCO3P40-201ENST00000392516 676 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AC078809.1-201ENST00000427601 140 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AL358934.1-201ENST00000432346 324 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 ZNF321P-202ENST00000550843 495 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AC012467.1-201ENST00000607740 256 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 SNORD116-23-201ENST00000384645 92 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 SNORA25.13-201ENST00000516395 103 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 SNORD11B-201ENST00000607707 90 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 U3.4-201ENST00000363352 213 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 RNU6-83P-201ENST00000384568 112 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AL390729.2-201ENST00000416137 156 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AC087894.1-201ENST00000538359 518 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AL138889.2-201ENST00000603883 242 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 AF250324.2-201ENST00000608299 610 ntBASIC-0.99□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.377-201ENST00000365644 108 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU6-708P-201ENST00000384217 107 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AC090844.1-201ENST00000422019 156 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 MTND1P8-201ENST00000571424 950 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU6-484P-201ENST00000384016 107 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 MIR8485-201ENST00000401372 91 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RPL39P6-201ENST00000448289 150 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNA5SP405-201ENST00000363059 114 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 SNORD114-17-201ENST00000364699 75 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AL603914.1-201ENST00000401964 204 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU7-57P-201ENST00000459540 60 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU6-221P-201ENST00000459541 99 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AC105417.1-201ENST00000514691 285 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU6-377P-201ENST00000515965 102 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1□□□□□ -2.57
VPS13DQ5THJ4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1□□□□□ -2.57
VPS13DQ5THJ4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1□□□□□ -2.57
VPS13DQ5THJ4 RNU6-817P-201ENST00000391083 104 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 MIR548I3-201ENST00000408378 149 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 RNU6-721P-201ENST00000410155 105 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AC004386.2-201ENST00000441858 148 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AC244090.1-201ENST00000441884 93 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 HMGN2P32-201ENST00000444648 269 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 RNA5SP135-201ENST00000517019 125 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 RNU6-704P-201ENST00000364162 103 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 RNU6-847P-201ENST00000411115 108 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 SNORA31.3-201ENST00000516029 96 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 RNU6-410P-201ENST00000517006 107 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 MIR4637-201ENST00000582405 84 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AC091178.2-201ENST00000584401 117 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 AC078880.5-201ENST00000617845 421 ntBASIC-1.01□□□□□ -2.57
VPS13DQ5THJ4 SNORD38C-201ENST00000384381 69 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 MIR208B-201ENST00000401172 77 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 RNU4-83P-201ENST00000410863 133 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 RPL30P16-201ENST00000419341 429 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 MTND5P42-201ENST00000637720 498 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 MIR586-201ENST00000385035 97 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 MTCO3P19-201ENST00000415864 321 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 RNY4P37-201ENST00000516225 96 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 snoR1.1-201ENST00000628177 80 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 AL078595.1-201ENST00000404458 226 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 MIR3139-201ENST00000579145 76 ntBASIC-1.02□□□□□ -2.57
VPS13DQ5THJ4 SNORA72.3-201ENST00000365074 132 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 AC012306.1-201ENST00000423267 114 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 MIR6082-201ENST00000613604 109 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 SNORA1.2-201ENST00000365189 134 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 MIR181A1-201ENST00000385026 110 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 AC018865.2-201ENST00000423631 129 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 PIGPP3-201ENST00000425307 415 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 AL353572.1-201ENST00000442490 417 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 SNORA43.2-201ENST00000516652 128 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU7-161P-201ENST00000517289 62 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 MIR5692A1-201ENST00000580523 69 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.03□□□□□ -2.57
VPS13DQ5THJ4 SNORA27.3-201ENST00000364937 134 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms