Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC097462.1-201ENST00000514125 324 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 RNU7-172P-201ENST00000517125 64 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 U6.73-201ENST00000619194 103 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 AC068647.2-201ENST00000637380 353 ntBASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TTC39AQ5SRH9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 WWP1P1-201ENST00000466609 2769 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 Y_RNA.200-201ENST00000364018 102 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RNY4P28-201ENST00000365281 93 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RNU6-117P-201ENST00000365415 107 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 Y_RNA.626-201ENST00000411288 95 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 AC104332.1-201ENST00000440471 797 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 AC117454.1-201ENST00000491120 168 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RNU6-1146P-201ENST00000516282 102 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 RNY3P16-201ENST00000516338 101 ntBASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.03□□□□□ -2.08
TTC39AQ5SRH9 Y_RNA.199-201ENST00000364014 102 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 RNU6-200P-201ENST00000364743 107 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 U8.7-201ENST00000364940 136 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 SNORD48-201ENST00000364953 64 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 RNU6-376P-201ENST00000384731 106 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 MIR518A2-201ENST00000384966 87 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 EBAG9P1-201ENST00000418955 543 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 MTND5P15-201ENST00000434246 349 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 RNU7-128P-201ENST00000517247 62 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 AC015720.1-201ENST00000565251 277 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 AC073349.3-201ENST00000617616 186 ntBASIC2.02□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.83-201ENST00000363005 113 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 RNU1-96P-201ENST00000364163 162 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 RNU4-10P-201ENST00000364383 140 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.297-201ENST00000364950 91 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 MIR1283-2-201ENST00000408621 87 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 AC244636.1-201ENST00000421152 228 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 AC073413.2-201ENST00000604332 360 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 AL078604.3-201ENST00000615580 211 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 AC013791.1-201ENST00000616619 62 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 U6.108-201ENST00000637764 58 ntBASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TTC39AQ5SRH9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2□□□□□ -2.09
TTC39AQ5SRH9 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 RNU6-923P-201ENST00000364753 107 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 MT-TR-201ENST00000387439 65 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2□□□□□ -2.09
TTC39AQ5SRH9 RNU6-1278P-201ENST00000516130 107 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 AC024405.2-202ENST00000532731 184 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 CBX3P4-201ENST00000538909 354 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 MIR5692C2-201ENST00000577959 77 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 AC005972.2-201ENST00000604690 348 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 AL353149.1-201ENST00000610667 244 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 AL365265.1-201ENST00000621045 234 ntBASIC2□□□□□ -2.09
TTC39AQ5SRH9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
TTC39AQ5SRH9 MIR411-201ENST00000362239 96 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 RNU6-899P-201ENST00000363947 107 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 RNU4-13P-201ENST00000364019 141 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 RNA5SP323-201ENST00000391094 133 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 SNORA17.3-201ENST00000391159 129 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 RNA5SP212-201ENST00000391223 107 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 AL162725.1-201ENST00000435405 301 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 RNU7-115P-201ENST00000516433 55 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 POLR3GP1-201ENST00000594073 261 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 AL359075.3-201ENST00000613288 217 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 MIR548AY-201ENST00000617669 107 ntBASIC1.99□□□□□ -2.09
TTC39AQ5SRH9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 SNORA8-201ENST00000384574 139 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 RNU6-493P-201ENST00000391321 108 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 CST2P1-201ENST00000425770 87 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 RPS4XP11-201ENST00000446897 772 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 AL163195.1-201ENST00000496941 348 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 RNU7-99P-201ENST00000516271 62 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 RNU1-142P-201ENST00000516682 145 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.98□□□□□ -2.09
TTC39AQ5SRH9 RNU6-653P-201ENST00000363074 106 ntBASIC1.97□□□□□ -2.09
TTC39AQ5SRH9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms