Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 MIR4744-201ENST00000581563 82 ntBASIC2.48□□□□□ -2.01
CCDC178Q5BJE1 RNU6-804P-201ENST00000384286 107 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 SNORA72-201ENST00000384339 132 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 RN7SKP284-201ENST00000411002 343 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 AC090255.1-201ENST00000495779 349 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 RNU7-99P-201ENST00000516271 62 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 AC011604.1-201ENST00000545978 196 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 AC021753.1-201ENST00000635724 168 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.47□□□□□ -2.01
CCDC178Q5BJE1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 MIR597-201ENST00000384968 97 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 SEPT7P4-201ENST00000437076 306 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 RNU6-255P-201ENST00000516957 105 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.121-201ENST00000363309 113 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU6-103P-201ENST00000363686 107 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU6-1080P-201ENST00000383982 107 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.464-201ENST00000384282 110 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU6-578P-201ENST00000390980 103 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU11-3P-201ENST00000391111 133 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 AL606845.1-201ENST00000404881 255 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU5E-9P-201ENST00000411164 104 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 AL121914.1-201ENST00000450188 156 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 RNU7-128P-201ENST00000517247 62 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 AC108706.1-201ENST00000611053 297 ntBASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC178Q5BJE1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.357-201ENST00000365487 109 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 MIR520G-201ENST00000385064 90 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 MIR616-201ENST00000385293 97 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AL117342.1-201ENST00000404861 406 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AL445646.1-201ENST00000431784 216 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 RPS27P21-201ENST00000486977 252 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 MIR5002-201ENST00000584713 97 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AL049861.1-201ENST00000603130 150 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 AL353149.1-201ENST00000610667 244 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 MIR6079-201ENST00000635807 62 ntBASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.75-201ENST00000362927 97 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 RNU6-275P-201ENST00000364910 107 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 RNU4-52P-201ENST00000384209 138 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 AC099677.2-201ENST00000436385 175 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 AL163195.1-201ENST00000496941 348 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 AC109810.1-201ENST00000534066 224 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 RPL23AP91-201ENST00000569211 455 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 MIR3124-201ENST00000582636 67 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 AC012640.5-201ENST00000623897 319 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 U6.108-201ENST00000637764 58 ntBASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC178Q5BJE1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 Y_RNA.398-201ENST00000383952 99 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 SNORD116-18-201ENST00000383961 92 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 AL512604.1-201ENST00000404812 257 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 RNU6-1135P-201ENST00000411083 103 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 CST2P1-201ENST00000425770 87 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 RNU6-561P-201ENST00000516222 102 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 MTND5P41-201ENST00000517498 206 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 MIR3144-201ENST00000579460 79 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 MIR3133-201ENST00000583157 78 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
CCDC178Q5BJE1 AC018630.2-201ENST00000534866 2403 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 RNU6-312P-201ENST00000364629 107 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 RNU11-5P-201ENST00000391216 129 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 AL023284.1-201ENST00000403956 276 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 AC006461.1-201ENST00000412637 326 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 MIR5094-201ENST00000578766 85 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 AL391903.3-201ENST00000612158 163 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 JPX_2.1-201ENST00000614161 69 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 ICE2P2-201ENST00000483823 2787 ntBASIC2.41□□□□□ -2.02
CCDC178Q5BJE1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC178Q5BJE1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 AC100821.1-201ENST00000523153 2479 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms