Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL008987.1-201ENST00000415528 237 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 MTATP6P25-201ENST00000574491 261 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 MIR4324-201ENST00000584846 72 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 MIR8066-201ENST00000617280 78 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 AC005609.4-201ENST00000625071 447 ntBASIC-1.47□□□□□ -2.64
CCDC58Q4VC31 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 SNORD50B-201ENST00000364995 70 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 SNORA1-201ENST00000384107 130 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 MIR204-201ENST00000385200 110 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 U8.17-201ENST00000391292 132 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 AL354751.2-201ENST00000415471 210 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 RNU7-167P-201ENST00000459160 62 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 RNU7-138P-201ENST00000459479 64 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 uc_338.11-201ENST00000619132 160 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 MIR6738-201ENST00000619620 64 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 SEPT14P19-203ENST00000633205 211 ntBASIC-1.48□□□□□ -2.65
CCDC58Q4VC31 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 RNU6-784P-201ENST00000384330 106 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 SNORA75.4-201ENST00000391278 119 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 AL138752.1-201ENST00000452964 351 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 AC016550.1-201ENST00000505348 785 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 RNU6-830P-201ENST00000516353 107 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 RNA5SP470-201ENST00000516463 106 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 RNU6-107P-201ENST00000516643 102 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 RNU6-410P-201ENST00000517006 107 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 MIR378F-201ENST00000578143 78 ntBASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.49□□□□□ -2.65
CCDC58Q4VC31 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 AC073464.1-201ENST00000429823 534 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 AC105417.1-201ENST00000514691 285 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 RNU6-489P-201ENST00000618289 107 ntBASIC-1.5□□□□□ -2.65
CCDC58Q4VC31 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 SNORA22B-201ENST00000383876 138 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 RNU6-24P-201ENST00000384440 107 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 RNU6-855P-201ENST00000410395 104 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 MIR4703-201ENST00000577728 79 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 AC005771.1-201ENST00000585581 349 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 AL049777.1-201ENST00000622740 518 ntBASIC-1.51□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 RNU6-280P-201ENST00000364145 104 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 RNY3P5-201ENST00000384127 102 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 MIR588-201ENST00000384900 83 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 MT-TF-201ENST00000387314 71 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 RNU6-131P-201ENST00000391144 107 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 SNORD27.1-201ENST00000516319 72 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 SCOCP1-201ENST00000554676 349 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 AL512506.1-201ENST00000613918 449 ntBASIC-1.52□□□□□ -2.65
CCDC58Q4VC31 RNU6-490P-201ENST00000362985 107 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 SNORD115-32-201ENST00000364079 82 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 RNY4P3-201ENST00000365254 95 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 RNU6-757P-201ENST00000410334 100 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 RNU6-847P-201ENST00000411115 108 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 SNRPGP10-201ENST00000432323 225 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 AL512286.1-201ENST00000439244 400 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 RNU2-13P-201ENST00000515909 113 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 RN7SKP19-201ENST00000516016 252 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 AC018462.2-201ENST00000605375 395 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 AC010205.1-201ENST00000616668 449 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 AL158209.2-201ENST00000619266 216 ntBASIC-1.53□□□□□ -2.65
CCDC58Q4VC31 ZNF299P-201ENST00000406845 1804 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 AL589826.1-201ENST00000340697 249 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 MIR153-2-201ENST00000385225 87 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 MTATP6P20-201ENST00000414147 562 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 SSR1P2-201ENST00000415208 787 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 GMFBP1-201ENST00000467831 427 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 AL157687.1-201ENST00000554853 619 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 AC023510.2-201ENST00000622162 746 ntBASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.54□□□□□ -2.66
CCDC58Q4VC31 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 RNU6-931P-201ENST00000363850 107 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 SNORA1.2-201ENST00000365189 134 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 RNU6-721P-201ENST00000410155 105 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 RNU4-83P-201ENST00000410863 133 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 RNU6-475P-201ENST00000516073 104 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 AC069431.2-201ENST00000604149 1099 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 AL136370.1-201ENST00000608166 691 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 AC087588.2-201ENST00000617667 426 ntBASIC-1.55□□□□□ -2.66
CCDC58Q4VC31 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 RNU6-455P-201ENST00000384681 107 ntBASIC-1.56□□□□□ -2.66
CCDC58Q4VC31 MTCO2P27-201ENST00000420740 428 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 365.2 ms