Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNU6-580P-201ENST00000365159 107 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-95P-201ENST00000384697 107 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 MIR329-2-201ENST00000385029 84 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 SNORA69.1-201ENST00000390904 137 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-131P-201ENST00000391144 107 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-613P-201ENST00000410412 108 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RPS26P5-201ENST00000418544 335 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 AL590632.1-201ENST00000424289 371 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-436P-201ENST00000516171 114 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU1-54P-201ENST00000517181 120 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 MIR6128-201ENST00000615528 109 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 MIR3662-201ENST00000637030 95 ntBASIC0.28□□□□□ -2.36
CACNA1SQ13698 RNU6-451P-201ENST00000362921 107 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 SNORA25.3-201ENST00000363205 127 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNU6-961P-201ENST00000363893 105 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNU6-324P-201ENST00000363957 106 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.242-201ENST00000364473 110 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.364-201ENST00000365532 101 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.405-201ENST00000383979 100 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.451-201ENST00000384200 100 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.524-201ENST00000384564 100 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.561-201ENST00000384694 100 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 SNORD41-201ENST00000386967 70 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNU6-908P-201ENST00000410160 94 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.27□□□□□ -2.37
CACNA1SQ13698 MTND1P17-201ENST00000448961 204 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RPL23AP54-201ENST00000495129 419 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 MIR4636-201ENST00000582271 80 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNY4P14-201ENST00000363656 96 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.368-201ENST00000365547 113 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNY3P4-201ENST00000384428 101 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.557-201ENST00000384680 107 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1SQ13698 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1SQ13698 MTND1P29-201ENST00000448112 647 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 FCF1P4-201ENST00000448326 183 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNU6-625P-201ENST00000459412 107 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.27□□□□□ -2.37
CACNA1SQ13698 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 AC005972.2-201ENST00000604690 348 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 AC015540.1-201ENST00000615828 501 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
CACNA1SQ13698 Y_RNA.339-201ENST00000365325 102 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 RNU6-710P-201ENST00000410424 105 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 RPS3AP1-201ENST00000413190 320 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1SQ13698 RPS29P25-201ENST00000481709 171 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 MIR4778-201ENST00000577635 80 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 MIR3942-201ENST00000585264 109 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 RBM11P1-201ENST00000604951 799 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 LARP7P1-201ENST00000605576 316 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 AL591926.4-201ENST00000616895 298 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
CACNA1SQ13698 AC074085.1-201ENST00000413598 418 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 RNU7-41P-201ENST00000515917 61 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 RNU6-1007P-201ENST00000516586 107 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 RNA5SP285-201ENST00000516619 119 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 RNU2-12P-201ENST00000517216 168 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1SQ13698 AC109635.3-201ENST00000529536 185 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 MIR5190-201ENST00000581537 80 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 MIR4264-201ENST00000583520 66 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1SQ13698 MIR3674-201ENST00000636576 68 ntBASIC0.25□□□□□ -2.37
CACNA1SQ13698 Y_RNA.577-201ENST00000384794 101 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 RNU6-780P-201ENST00000391030 104 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AL022718.1-201ENST00000412004 84 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 UQCRBP2-201ENST00000447827 297 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1SQ13698 RNU7-56P-201ENST00000458744 62 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 snoU13.21-201ENST00000459368 105 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AL136317.1-201ENST00000612653 226 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AC127459.3-201ENST00000624328 466 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 Y_RNA.9-201ENST00000362354 101 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 RNU6-99P-201ENST00000364721 107 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1SQ13698 RNU6-318P-201ENST00000384283 103 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AC026782.1-201ENST00000512952 449 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.24□□□□□ -2.37
CACNA1SQ13698 SNORA40.9-201ENST00000515895 93 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1SQ13698 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 POLR3GP1-201ENST00000594073 261 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 AC022441.3-201ENST00000605737 136 ntBASIC0.24□□□□□ -2.37
CACNA1SQ13698 RNU6-1252P-201ENST00000363054 104 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 SNORD50B-201ENST00000364995 70 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 RNU6-1335P-201ENST00000365426 107 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 Y_RNA.498-201ENST00000384460 102 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 SNORD12B-201ENST00000410433 91 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 RNU6-1304P-201ENST00000411374 106 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 AL139396.1-201ENST00000421137 167 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 HMGN1P10-201ENST00000474557 553 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1SQ13698 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.23□□□□□ -2.37
CACNA1SQ13698 SCARNA8-201ENST00000515924 131 ntBASIC0.23□□□□□ -2.37
CACNA1SQ13698 RNU6-307P-201ENST00000516743 106 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms