Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL357312.1-201ENST00000603879 298 ntBASIC1.23□□□□□ -2.21
CALD1Q05682 MIR6857-201ENST00000613267 93 ntBASIC1.23□□□□□ -2.21
CALD1Q05682 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CALD1Q05682 Y_RNA.253-201ENST00000364562 112 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 Y_RNA.263-201ENST00000364659 114 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 RNU6-1105P-201ENST00000384774 107 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 MLLT10P1-201ENST00000418346 262 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 RPS20P10-201ENST00000451209 253 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 RNU6-113P-201ENST00000516653 101 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 MIR4801-201ENST00000582704 82 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 AC091925.1-201ENST00000623204 462 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
CALD1Q05682 U8.5-201ENST00000364528 136 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 RNU6-855P-201ENST00000410395 104 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 MCFD2P1-201ENST00000417812 300 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 MTND1P14-201ENST00000427400 950 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 MTND5P20-201ENST00000448677 143 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 SNORD116-28-201ENST00000516123 91 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 MIR5188-201ENST00000583467 113 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 AC005972.2-201ENST00000604690 348 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
CALD1Q05682 Y_RNA.336-201ENST00000365307 109 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 AC005042.3-201ENST00000453230 174 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 LINC01399-202ENST00000458450 244 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 RPL39P28-201ENST00000465655 155 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.2□□□□□ -2.22
CALD1Q05682 RNU4-77P-201ENST00000516692 156 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 Y_RNA.702-201ENST00000516843 96 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 MIR6504-201ENST00000613520 61 ntBASIC1.2□□□□□ -2.22
CALD1Q05682 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
CALD1Q05682 Y_RNA.5-201ENST00000362334 102 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 Y_RNA.39-201ENST00000362620 98 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 Y_RNA.80-201ENST00000362996 102 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 Y_RNA.485-201ENST00000384395 102 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CALD1Q05682 MIR1298-201ENST00000408783 112 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 AF228730.4-201ENST00000421457 183 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.19□□□□□ -2.22
CALD1Q05682 MIR4423-201ENST00000580922 80 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 DEFB117-201ENST00000602356 141 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
CALD1Q05682 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 SNORA25.9-201ENST00000365087 128 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 Y_RNA.331-201ENST00000365267 102 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 MIR452-201ENST00000385020 85 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 MIR522-201ENST00000385071 87 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 AL590004.1-201ENST00000405321 300 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 AL160004.2-201ENST00000432935 350 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 AC236972.2-201ENST00000434979 310 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 snoU13.25-201ENST00000458945 104 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 Y_RNA.676-201ENST00000516393 96 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 SNORD58B-201ENST00000607313 66 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.18□□□□□ -2.22
CALD1Q05682 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
CALD1Q05682 Y_RNA.252-201ENST00000364556 101 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 Y_RNA.315-201ENST00000365117 102 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 Y_RNA.458-201ENST00000384240 102 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 RNY3P14-201ENST00000384309 102 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 SNORA72-201ENST00000384339 132 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 AC022616.4-201ENST00000522985 181 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.17□□□□□ -2.22
CALD1Q05682 MIR3192-201ENST00000584920 77 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 AC136443.5-201ENST00000603741 370 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 Y_RNA.772-201ENST00000606692 102 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 Y_RNA.804-201ENST00000615262 101 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 AC010205.1-201ENST00000616668 449 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 AL606534.2-204ENST00000635008 178 ntBASIC1.17□□□□□ -2.22
CALD1Q05682 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CALD1Q05682 SNORD81.1-201ENST00000363064 77 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 AL390729.2-201ENST00000416137 156 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 RNU7-110P-201ENST00000516891 62 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 MIR3145-201ENST00000580727 82 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 RPS29P30-201ENST00000600975 111 ntBASIC1.16□□□□□ -2.22
CALD1Q05682 RNU6-1084P-201ENST00000362498 107 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 RNU1-115P-201ENST00000365329 160 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 Y_RNA.341-201ENST00000365341 102 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 Y_RNA.579-201ENST00000390939 94 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 RNU4-30P-201ENST00000410245 143 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.15□□□□□ -2.23
CALD1Q05682 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 RPS26P48-201ENST00000491713 339 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 RNU6-976P-201ENST00000516086 111 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 SNORD45.4-201ENST00000516629 73 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 MIR4795-201ENST00000584182 89 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 AC011373.1-201ENST00000607270 237 ntBASIC1.15□□□□□ -2.23
CALD1Q05682 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CALD1Q05682 RNU4-73P-201ENST00000363164 141 ntBASIC1.14□□□□□ -2.23
CALD1Q05682 RNU6-937P-201ENST00000384325 106 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms