Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 SNORD11-201ENST00000459124 84 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 OR9P1P-201ENST00000496431 281 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 AC011406.1-201ENST00000512440 370 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 RNU6-1041P-201ENST00000516254 102 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 RNU7-149P-201ENST00000516739 59 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 AL160236.1-201ENST00000556317 195 ntBASIC3.21□□□□□ -1.9
PTPN12Q05209 AC131280.1-202ENST00000624067 4211 ntBASIC3.2□□□□□ -1.9
PTPN12Q05209 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PTPN12Q05209 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN12Q05209 RNU1-91P-201ENST00000364746 163 ntBASIC3.2□□□□□ -1.9
PTPN12Q05209 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN12Q05209 NDUFA5P6-201ENST00000542110 379 ntBASIC3.2□□□□□ -1.9
PTPN12Q05209 AC007229.1-201ENST00000590455 412 ntBASIC3.2□□□□□ -1.9
PTPN12Q05209 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.2□□□□□ -1.9
PTPN12Q05209 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN12Q05209 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 RNA5SP289-201ENST00000362332 137 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PTPN12Q05209 RNU11-5P-201ENST00000391216 129 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN12Q05209 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN12Q05209 RNU7-26P-201ENST00000458980 63 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 RNA5SP320-201ENST00000516263 124 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 SNORA18.4-201ENST00000516440 124 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 RNU6-1291P-201ENST00000516591 104 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PTPN12Q05209 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN12Q05209 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
PTPN12Q05209 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN12Q05209 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN12Q05209 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPN12Q05209 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPN12Q05209 snoU2-30.2-201ENST00000362805 70 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 Y_RNA.267-201ENST00000364679 109 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 MLLT10P1-201ENST00000418346 262 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 Z98742.3-201ENST00000418637 326 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 MIR4662B-201ENST00000579498 81 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 AC131055.1-201ENST00000584626 316 ntBASIC3.18□□□□□ -1.9
PTPN12Q05209 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPN12Q05209 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN12Q05209 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPN12Q05209 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
PTPN12Q05209 MIR27B-201ENST00000385129 97 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 RNA5SP323-201ENST00000391094 133 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 RNA5SP467-201ENST00000391274 118 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN12Q05209 RNU7-99P-201ENST00000516271 62 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 RNU6-365P-201ENST00000517113 106 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 AC133485.4-201ENST00000561835 220 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 MTND5P34-201ENST00000568888 325 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 AC138907.4-201ENST00000570107 226 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 AC007336.1-201ENST00000576365 3828 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 MIR3126-201ENST00000577443 74 ntBASIC3.17□□□□□ -1.9
PTPN12Q05209 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN12Q05209 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN12Q05209 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN12Q05209 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN12Q05209 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPN12Q05209 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN12Q05209 MIR340-201ENST00000362125 95 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-834P-201ENST00000362367 110 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 Y_RNA.120-201ENST00000363304 110 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 Y_RNA.486-201ENST00000384398 107 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-1072P-201ENST00000384703 107 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-443P-201ENST00000384780 107 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 MIR562-201ENST00000384894 95 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-1064P-201ENST00000410626 104 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN12Q05209 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-1061P-201ENST00000516530 99 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU6-126P-201ENST00000516685 103 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 RNU1-104P-201ENST00000517280 175 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 AC022217.4-201ENST00000604389 163 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 AL359075.3-201ENST00000613288 217 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 CTSLP2-204ENST00000629029 392 ntBASIC3.16□□□□□ -1.9
PTPN12Q05209 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PTPN12Q05209 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN12Q05209 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN12Q05209 SNORA12.1-201ENST00000390873 148 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 SNRPGP10-201ENST00000432323 225 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN12Q05209 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN12Q05209 HMGN1P7-201ENST00000491722 313 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 Y_RNA.690-201ENST00000516603 95 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 RNU1-142P-201ENST00000516682 145 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 AC007536.1-201ENST00000533382 349 ntBASIC3.15□□□□□ -1.91
PTPN12Q05209 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN12Q05209 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN12Q05209 RNU1-96P-201ENST00000364163 162 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 RNU6-1138P-201ENST00000365359 106 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 RNA5SP210-201ENST00000391034 120 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 RNU6-772P-201ENST00000516042 105 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 MIR6129-201ENST00000616087 109 ntBASIC3.14□□□□□ -1.91
PTPN12Q05209 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPN12Q05209 SNORD115-3-201ENST00000363100 82 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms