Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 Y_RNA.778-201ENST00000620203 90 ntBASIC2.43□□□□□ -2.02
IRF9Q00978 CTSLP2-204ENST00000629029 392 ntBASIC2.43□□□□□ -2.02
IRF9Q00978 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
IRF9Q00978 AL136360.1-201ENST00000503377 1900 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 MIR126-201ENST00000362291 85 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 RNU6-151P-201ENST00000364158 107 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 Y_RNA.400-201ENST00000383963 111 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 RNA5SP184-201ENST00000411071 108 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.42□□□□□ -2.02
IRF9Q00978 OR9P1P-201ENST00000496431 281 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 SNORD116-25-201ENST00000516517 92 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 RNU7-149P-201ENST00000516739 59 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 AL160236.1-201ENST00000556317 195 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 MIR4672-201ENST00000583126 81 ntBASIC2.42□□□□□ -2.02
IRF9Q00978 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
IRF9Q00978 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
IRF9Q00978 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
IRF9Q00978 AC062016.1-201ENST00000355719 319 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 RNU6-1138P-201ENST00000365359 106 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 MIR196B-201ENST00000384852 84 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 AC108938.1-201ENST00000451204 136 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.41□□□□□ -2.02
IRF9Q00978 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.41□□□□□ -2.02
IRF9Q00978 RNVU1-2-201ENST00000516326 135 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 MIR4662B-201ENST00000579498 81 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 Pinc.1-201ENST00000616452 154 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.41□□□□□ -2.02
IRF9Q00978 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
IRF9Q00978 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.02
IRF9Q00978 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 SNORA12.1-201ENST00000390873 148 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 RNU6-131P-201ENST00000391144 107 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 RNU6-126P-201ENST00000516685 103 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 Y_RNA.714-201ENST00000517065 90 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 RNU6-789P-201ENST00000517105 102 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 MIR3658-201ENST00000636291 56 ntBASIC2.4□□□□□ -2.03
IRF9Q00978 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
IRF9Q00978 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
IRF9Q00978 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
IRF9Q00978 Y_RNA.488-201ENST00000384403 102 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 Y_RNA.521-201ENST00000384560 114 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MIR522-201ENST00000385071 87 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MIR613-201ENST00000385248 95 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
IRF9Q00978 RNU2-70P-201ENST00000410718 179 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 RNA5SP501-201ENST00000410990 112 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MLLT10P1-201ENST00000418346 262 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
IRF9Q00978 RNU6-406P-201ENST00000516470 107 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 RNA5SP153-201ENST00000516498 76 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 RNU7-193P-201ENST00000516723 65 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.39□□□□□ -2.03
IRF9Q00978 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.39□□□□□ -2.03
IRF9Q00978 MIR378D2-201ENST00000580636 98 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MIR3910-1-201ENST00000580936 111 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MIR3162-201ENST00000581818 82 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 AC087685.1-201ENST00000587507 141 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 MIR8054-201ENST00000620877 86 ntBASIC2.39□□□□□ -2.03
IRF9Q00978 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
IRF9Q00978 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
IRF9Q00978 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.38□□□□□ -2.03
IRF9Q00978 SNORD68-201ENST00000363214 84 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 Y_RNA.215-201ENST00000364204 112 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 SNORA63D-201ENST00000364359 132 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 Y_RNA.265-201ENST00000364677 108 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 Y_RNA.634-201ENST00000364811 113 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 RNU6-818P-201ENST00000364837 108 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 RNU4-11P-201ENST00000365287 132 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 SNORD50.2-201ENST00000365465 70 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 Y_RNA.393-201ENST00000383936 102 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 RNU6-768P-201ENST00000384683 107 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
IRF9Q00978 RNA5SP482-201ENST00000391269 118 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 SNORA26-201ENST00000391286 122 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
IRF9Q00978 MRPS17P9-201ENST00000511924 393 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 RNU7-28P-201ENST00000516759 62 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 AC097639.2-201ENST00000603159 172 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.38□□□□□ -2.03
IRF9Q00978 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
IRF9Q00978 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
IRF9Q00978 ZNF702P-202ENST00000434269 1966 ntBASIC2.38□□□□□ -2.03
IRF9Q00978 MIR449A-201ENST00000362113 91 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 Y_RNA.91-201ENST00000363042 107 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 RNU6-440P-201ENST00000390882 105 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 FTH1P12-201ENST00000432137 551 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IRF9Q00978 AC091544.4-201ENST00000555268 342 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 SUB1P4-201ENST00000566062 339 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 MIR3646-201ENST00000578301 84 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 AC008507.4-201ENST00000585464 127 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms