Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SEC61A1P61619 RNU6-804P-201ENST00000384286 107 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 MIR29C-201ENST00000385231 88 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SEC61A1P61619 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 AC245102.2-201ENST00000448956 180 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.86□□□□□ -2.11
SEC61A1P61619 AC091021.1-201ENST00000468051 388 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 Y_RNA.797-201ENST00000515977 94 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 RNU6-1146P-201ENST00000516282 102 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.86□□□□□ -2.11
SEC61A1P61619 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.86□□□□□ -2.11
SEC61A1P61619 MIR203B-201ENST00000636080 86 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 U6.108-201ENST00000637764 58 ntBASIC1.86□□□□□ -2.11
SEC61A1P61619 Y_RNA.229-201ENST00000364347 113 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 Y_RNA.240-201ENST00000364469 95 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AL603908.1-201ENST00000406098 201 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 Y_RNA.621-201ENST00000411065 96 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNU5E-9P-201ENST00000411164 104 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.85□□□□□ -2.11
SEC61A1P61619 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SEC61A1P61619 AC233266.1-201ENST00000454518 96 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNU6-437P-201ENST00000459408 95 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AC055731.1-201ENST00000474387 401 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNVU1-2-201ENST00000516326 135 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNA5SP200-201ENST00000516360 103 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.85□□□□□ -2.11
SEC61A1P61619 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.85□□□□□ -2.11
SEC61A1P61619 MIR1273D-201ENST00000577266 86 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AC242852.1-201ENST00000612151 96 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 AC244015.1-201ENST00000622301 99 ntBASIC1.85□□□□□ -2.11
SEC61A1P61619 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU6-144P-201ENST00000383951 107 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU6-1080P-201ENST00000383982 107 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 Y_RNA.435-201ENST00000384095 112 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 MIR526A2-201ENST00000390198 65 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNA5SP323-201ENST00000391094 133 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 SEPT7P4-201ENST00000437076 306 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RN7SKP164-201ENST00000516138 266 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU6-561P-201ENST00000516222 102 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU7-116P-201ENST00000516940 62 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 RNU6-1096P-201ENST00000517089 102 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 MTND5P41-201ENST00000517498 206 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
SEC61A1P61619 AC011604.1-201ENST00000545978 196 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 MIR4648-201ENST00000580107 72 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 AL359075.3-201ENST00000613288 217 ntBASIC1.84□□□□□ -2.11
SEC61A1P61619 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SEC61A1P61619 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
SEC61A1P61619 RNU4-41P-201ENST00000364426 143 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 Y_RNA.267-201ENST00000364679 109 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 SNORA6-201ENST00000384033 151 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 SNORA72-201ENST00000384339 132 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 SNORA8-201ENST00000384574 139 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNU6-1135P-201ENST00000411083 103 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.83□□□□□ -2.12
SEC61A1P61619 AC010154.1-201ENST00000425857 269 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNU7-99P-201ENST00000516271 62 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNU1-142P-201ENST00000516682 145 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.83□□□□□ -2.12
SEC61A1P61619 MIR4744-201ENST00000581563 82 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 AC108706.1-201ENST00000611053 297 ntBASIC1.83□□□□□ -2.12
SEC61A1P61619 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.83□□□□□ -2.12
SEC61A1P61619 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SEC61A1P61619 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SEC61A1P61619 Y_RNA.464-201ENST00000384282 110 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 RNU6-578P-201ENST00000390980 103 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 AL606845.1-201ENST00000404881 255 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 AL163195.1-201ENST00000496941 348 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 AL353149.1-201ENST00000610667 244 ntBASIC1.82□□□□□ -2.12
SEC61A1P61619 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.82□□□□□ -2.12
SEC61A1P61619 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SEC61A1P61619 Y_RNA.75-201ENST00000362927 97 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 Y_RNA.121-201ENST00000363309 113 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 RNU6-275P-201ENST00000364910 107 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 RNU6-1130P-201ENST00000365434 107 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 Y_RNA.398-201ENST00000383952 99 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 RNU6-187P-201ENST00000384139 106 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 MIR616-201ENST00000385293 97 ntBASIC1.81□□□□□ -2.12
SEC61A1P61619 RNA5SP465-201ENST00000391195 109 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms