Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
SRP54P61011 RNU6-155P-201ENST00000516347 100 ntBASIC0.91□□□□□ -2.26
SRP54P61011 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
SRP54P61011 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
SRP54P61011 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRP54P61011 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
SRP54P61011 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SRP54P61011 Y_RNA.27-201ENST00000362540 103 ntBASIC0.9□□□□□ -2.27
SRP54P61011 RNU6-324P-201ENST00000363957 106 ntBASIC0.9□□□□□ -2.27
SRP54P61011 Y_RNA.314-201ENST00000365114 102 ntBASIC0.9□□□□□ -2.27
SRP54P61011 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
SRP54P61011 MIR1298-201ENST00000408783 112 ntBASIC0.9□□□□□ -2.27
SRP54P61011 MIR548J-201ENST00000408833 112 ntBASIC0.9□□□□□ -2.27
SRP54P61011 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
SRP54P61011 RNU6-436P-201ENST00000516171 114 ntBASIC0.9□□□□□ -2.27
SRP54P61011 SNORA20.3-201ENST00000516880 132 ntBASIC0.9□□□□□ -2.27
SRP54P61011 MIR4659A-201ENST00000580269 81 ntBASIC0.9□□□□□ -2.27
SRP54P61011 RMST_2.1-201ENST00000617263 136 ntBASIC0.9□□□□□ -2.27
SRP54P61011 AC138305.3-201ENST00000624988 240 ntBASIC0.9□□□□□ -2.27
SRP54P61011 Y_RNA.253-201ENST00000364562 112 ntBASIC0.89□□□□□ -2.27
SRP54P61011 AC117470.1-201ENST00000381974 330 ntBASIC0.89□□□□□ -2.27
SRP54P61011 MIR522-201ENST00000385071 87 ntBASIC0.89□□□□□ -2.27
SRP54P61011 MIR559-201ENST00000385188 96 ntBASIC0.89□□□□□ -2.27
SRP54P61011 SNORA75.2-201ENST00000391138 150 ntBASIC0.89□□□□□ -2.27
SRP54P61011 SNORA75.3-201ENST00000391231 150 ntBASIC0.89□□□□□ -2.27
SRP54P61011 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
SRP54P61011 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
SRP54P61011 AC005972.2-201ENST00000604690 348 ntBASIC0.89□□□□□ -2.27
SRP54P61011 RBM11P1-201ENST00000604951 799 ntBASIC0.89□□□□□ -2.27
SRP54P61011 AC022441.3-201ENST00000605737 136 ntBASIC0.89□□□□□ -2.27
SRP54P61011 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.89□□□□□ -2.27
SRP54P61011 AL355073.2-201ENST00000612106 557 ntBASIC0.89□□□□□ -2.27
SRP54P61011 MIR7111-201ENST00000619751 72 ntBASIC0.89□□□□□ -2.27
SRP54P61011 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SRP54P61011 RNY3P11-201ENST00000364153 102 ntBASIC0.88□□□□□ -2.27
SRP54P61011 Y_RNA.387-201ENST00000383918 102 ntBASIC0.88□□□□□ -2.27
SRP54P61011 SNORA72-201ENST00000384339 132 ntBASIC0.88□□□□□ -2.27
SRP54P61011 RNU6-710P-201ENST00000410424 105 ntBASIC0.88□□□□□ -2.27
SRP54P61011 RNU6-1304P-201ENST00000411374 106 ntBASIC0.88□□□□□ -2.27
SRP54P61011 SNORA25.10-201ENST00000515926 124 ntBASIC0.88□□□□□ -2.27
SRP54P61011 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
SRP54P61011 MIR3192-201ENST00000584920 77 ntBASIC0.88□□□□□ -2.27
SRP54P61011 AC011476.5-201ENST00000615594 130 ntBASIC0.88□□□□□ -2.27
SRP54P61011 U6.92-201ENST00000636464 89 ntBASIC0.88□□□□□ -2.27
SRP54P61011 AC099654.14-201ENST00000638599 341 ntBASIC0.88□□□□□ -2.27
SRP54P61011 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SRP54P61011 Y_RNA.146-201ENST00000363549 102 ntBASIC0.87□□□□□ -2.27
SRP54P61011 Y_RNA.172-201ENST00000363765 102 ntBASIC0.87□□□□□ -2.27
SRP54P61011 Y_RNA.259-201ENST00000364619 101 ntBASIC0.87□□□□□ -2.27
SRP54P61011 MIR136-201ENST00000385207 82 ntBASIC0.87□□□□□ -2.27
SRP54P61011 AC138393.2-201ENST00000414742 246 ntBASIC0.87□□□□□ -2.27
SRP54P61011 HMGN2P32-201ENST00000444648 269 ntBASIC0.87□□□□□ -2.27
SRP54P61011 RPS20P10-201ENST00000451209 253 ntBASIC0.87□□□□□ -2.27
SRP54P61011 snoU13.25-201ENST00000458945 104 ntBASIC0.87□□□□□ -2.27
SRP54P61011 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
SRP54P61011 SNORA74.3-201ENST00000517108 154 ntBASIC0.87□□□□□ -2.27
SRP54P61011 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
SRP54P61011 RN7SKP295-201ENST00000517264 153 ntBASIC0.87□□□□□ -2.27
SRP54P61011 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.87□□□□□ -2.27
SRP54P61011 VN1R91P-201ENST00000594377 169 ntBASIC0.87□□□□□ -2.27
SRP54P61011 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.87□□□□□ -2.27
SRP54P61011 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SRP54P61011 RNU6-1040P-201ENST00000383974 107 ntBASIC0.86□□□□□ -2.27
SRP54P61011 MIR489-201ENST00000384923 84 ntBASIC0.86□□□□□ -2.27
SRP54P61011 RNY4P36-201ENST00000391116 96 ntBASIC0.86□□□□□ -2.27
SRP54P61011 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
SRP54P61011 MCFD2P1-201ENST00000417812 300 ntBASIC0.86□□□□□ -2.27
SRP54P61011 Y_RNA.714-201ENST00000517065 90 ntBASIC0.86□□□□□ -2.27
SRP54P61011 RNA5SP264-201ENST00000363115 107 ntBASIC0.85□□□□□ -2.27
SRP54P61011 snoU2-30.1-201ENST00000365012 70 ntBASIC0.85□□□□□ -2.27
SRP54P61011 Y_RNA.570-201ENST00000384750 101 ntBASIC0.85□□□□□ -2.27
SRP54P61011 MIR516B2-201ENST00000385190 85 ntBASIC0.85□□□□□ -2.27
SRP54P61011 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.85□□□□□ -2.27
SRP54P61011 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
SRP54P61011 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
SRP54P61011 RNU6-966P-201ENST00000516479 104 ntBASIC0.85□□□□□ -2.27
SRP54P61011 SNORD45.4-201ENST00000516629 73 ntBASIC0.85□□□□□ -2.27
SRP54P61011 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
SRP54P61011 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.85□□□□□ -2.27
SRP54P61011 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
SRP54P61011 AC122108.2-201ENST00000611946 526 ntBASIC0.85□□□□□ -2.27
SRP54P61011 RNU6-1084P-201ENST00000362498 107 ntBASIC0.84□□□□□ -2.27
SRP54P61011 Y_RNA.142-201ENST00000363491 102 ntBASIC0.84□□□□□ -2.27
SRP54P61011 SNORD14.1-201ENST00000365609 90 ntBASIC0.84□□□□□ -2.27
SRP54P61011 Y_RNA.384-201ENST00000383909 102 ntBASIC0.84□□□□□ -2.27
SRP54P61011 MIR520C-201ENST00000385005 87 ntBASIC0.84□□□□□ -2.27
SRP54P61011 RNU6-131P-201ENST00000391144 107 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AL390729.2-201ENST00000416137 156 ntBASIC0.84□□□□□ -2.27
SRP54P61011 RBMX2P4-201ENST00000441256 376 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AC005042.3-201ENST00000453230 174 ntBASIC0.84□□□□□ -2.27
SRP54P61011 RNU6-277P-201ENST00000516272 106 ntBASIC0.84□□□□□ -2.27
SRP54P61011 RNU7-43P-201ENST00000516554 64 ntBASIC0.84□□□□□ -2.27
SRP54P61011 RNU6-699P-201ENST00000517081 110 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AP003716.2-201ENST00000528260 108 ntBASIC0.84□□□□□ -2.27
SRP54P61011 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
SRP54P61011 MIR4423-201ENST00000580922 80 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
SRP54P61011 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AC022709.1-201ENST00000615967 87 ntBASIC0.84□□□□□ -2.27
SRP54P61011 AC010205.1-201ENST00000616668 449 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms