Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.32□□□□□ -2.46
FOXA3P55318 MIR6740-201ENST00000618268 113 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 AC023510.2-201ENST00000622162 746 ntBASIC-0.32□□□□□ -2.46
FOXA3P55318 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 SNORA72.1-201ENST00000363485 129 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 MIR802-201ENST00000390235 94 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 SNORA26.5-201ENST00000391215 123 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 MIR892B-201ENST00000401279 77 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 RNA5SP163-201ENST00000410304 99 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AL353193.1-201ENST00000421444 268 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 USP9YP16-201ENST00000430287 407 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 USP9YP23-201ENST00000455085 407 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 RNU7-165P-201ENST00000458864 60 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC104692.1-201ENST00000472406 90 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC083904.1-201ENST00000487828 231 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.33□□□□□ -2.46
FOXA3P55318 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.33□□□□□ -2.46
FOXA3P55318 ACA59.1-201ENST00000515966 143 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.33□□□□□ -2.46
FOXA3P55318 AC090617.3-201ENST00000573670 475 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 MIR4752-201ENST00000579672 72 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 MIR4743-201ENST00000584576 69 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC125232.2-201ENST00000592457 143 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AP002371.2-201ENST00000624450 503 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC007494.3-201ENST00000624660 743 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 MIR3674-201ENST00000636576 68 ntBASIC-0.33□□□□□ -2.46
FOXA3P55318 AC121333.1-201ENST00000567488 2709 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.34□□□□□ -2.46
FOXA3P55318 FGF7P2-201ENST00000332473 296 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MIR518F-201ENST00000384973 87 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MIR517A-201ENST00000385001 87 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MTCO1P20-201ENST00000425366 358 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MTATP6P13-201ENST00000438531 667 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 AL031667.1-201ENST00000440222 725 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MIR18B-201ENST00000454574 71 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MTND1P11-201ENST00000456661 876 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 AC116353.2-201ENST00000505332 712 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 PRDX4P1-201ENST00000507189 574 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 RNU6-782P-201ENST00000516852 104 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 MIR5696-201ENST00000578474 85 ntBASIC-0.34□□□□□ -2.46
FOXA3P55318 RNU4-28P-201ENST00000364739 141 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-767P-201ENST00000384132 107 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-95P-201ENST00000384697 107 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-847P-201ENST00000411115 108 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 MCFD2P1-201ENST00000417812 300 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 PDCL2P1-201ENST00000419302 352 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-625P-201ENST00000459412 107 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 SCARNA8-201ENST00000515924 131 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-504P-201ENST00000516568 104 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 RNU6-232P-201ENST00000517144 64 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 AC138869.1-201ENST00000568623 124 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 AC092447.9-201ENST00000603395 144 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 AC006380.1-201ENST00000603598 186 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 AC019193.3-201ENST00000609144 554 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 AC022306.2-201ENST00000617563 647 ntBASIC-0.35□□□□□ -2.47
FOXA3P55318 MIR410-201ENST00000362222 80 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 SNORD114-7-201ENST00000362520 77 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNY1P16-201ENST00000363063 111 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-254P-201ENST00000363377 107 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-324P-201ENST00000363957 106 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-553P-201ENST00000364047 96 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-652P-201ENST00000365488 107 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-925P-201ENST00000384629 104 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 MIR588-201ENST00000384900 83 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 MT-TH-201ENST00000387441 69 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-269P-201ENST00000391077 97 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 USMG5P1-201ENST00000425964 177 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 EIF1P2-201ENST00000428233 350 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 AC236972.2-201ENST00000434979 310 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 MTND3P16-201ENST00000452205 344 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-830P-201ENST00000516353 107 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 AC022616.4-201ENST00000522985 181 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 MIR3915-201ENST00000578518 97 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 AC092954.2-201ENST00000609103 430 ntBASIC-0.36□□□□□ -2.47
FOXA3P55318 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.36□□□□□ -2.47
FOXA3P55318 RNU6-268P-201ENST00000364174 107 ntBASIC-0.37□□□□□ -2.47
FOXA3P55318 RNU6-879P-201ENST00000364328 108 ntBASIC-0.37□□□□□ -2.47
FOXA3P55318 SNORA63C-201ENST00000364578 129 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms