Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MTCYBP6-201ENST00000441810 138 ntBASIC1.35□□□□□ -2.19
CDH13P55290 Y_RNA.701-201ENST00000516812 110 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.35□□□□□ -2.19
CDH13P55290 AC120024.3-201ENST00000603167 156 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AL355297.3-201ENST00000604082 446 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AP003357.1-201ENST00000604497 148 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
CDH13P55290 AL591926.4-201ENST00000616895 298 ntBASIC1.35□□□□□ -2.19
CDH13P55290 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CDH13P55290 SNORD113-8-201ENST00000363497 74 ntBASIC1.34□□□□□ -2.19
CDH13P55290 RNU6-450P-201ENST00000364654 107 ntBASIC1.34□□□□□ -2.19
CDH13P55290 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.34□□□□□ -2.19
CDH13P55290 AC010655.3-201ENST00000478818 450 ntBASIC1.34□□□□□ -2.19
CDH13P55290 RNU6-322P-201ENST00000516010 103 ntBASIC1.34□□□□□ -2.19
CDH13P55290 RNU6-397P-201ENST00000516226 104 ntBASIC1.34□□□□□ -2.19
CDH13P55290 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH13P55290 AL161670.1-201ENST00000554348 137 ntBASIC1.34□□□□□ -2.19
CDH13P55290 AC068647.2-201ENST00000637380 353 ntBASIC1.34□□□□□ -2.19
CDH13P55290 RNU4-90P-201ENST00000362773 141 ntBASIC1.33□□□□□ -2.2
CDH13P55290 SNORD68-201ENST00000363214 84 ntBASIC1.33□□□□□ -2.2
CDH13P55290 Y_RNA.136-201ENST00000363444 102 ntBASIC1.33□□□□□ -2.2
CDH13P55290 RNU6-457P-201ENST00000363999 107 ntBASIC1.33□□□□□ -2.2
CDH13P55290 Y_RNA.253-201ENST00000364562 112 ntBASIC1.33□□□□□ -2.2
CDH13P55290 AL590004.1-201ENST00000405321 300 ntBASIC1.33□□□□□ -2.2
CDH13P55290 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CDH13P55290 RNU6-496P-201ENST00000516145 99 ntBASIC1.33□□□□□ -2.2
CDH13P55290 AC136628.3-201ENST00000521868 290 ntBASIC1.33□□□□□ -2.2
CDH13P55290 POLR3GP1-201ENST00000594073 261 ntBASIC1.33□□□□□ -2.2
CDH13P55290 AC106754.2-201ENST00000623006 233 ntBASIC1.33□□□□□ -2.2
CDH13P55290 Y_RNA.152-201ENST00000363578 100 ntBASIC1.32□□□□□ -2.2
CDH13P55290 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
CDH13P55290 Y_RNA.286-201ENST00000364813 102 ntBASIC1.32□□□□□ -2.2
CDH13P55290 AC005534.2-201ENST00000431047 433 ntBASIC1.32□□□□□ -2.2
CDH13P55290 HMGN1P7-201ENST00000491722 313 ntBASIC1.32□□□□□ -2.2
CDH13P55290 RNU7-115P-201ENST00000516433 55 ntBASIC1.32□□□□□ -2.2
CDH13P55290 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
CDH13P55290 SNORA40.15-201ENST00000516884 107 ntBASIC1.32□□□□□ -2.2
CDH13P55290 Y_RNA.714-201ENST00000517065 90 ntBASIC1.32□□□□□ -2.2
CDH13P55290 CYP3A52P-201ENST00000563326 91 ntBASIC1.32□□□□□ -2.2
CDH13P55290 AC113195.1-201ENST00000579952 141 ntBASIC1.32□□□□□ -2.2
CDH13P55290 MIR3145-201ENST00000580727 82 ntBASIC1.32□□□□□ -2.2
CDH13P55290 MIR4680-201ENST00000580906 66 ntBASIC1.32□□□□□ -2.2
CDH13P55290 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
CDH13P55290 AC044792.1-201ENST00000593294 196 ntBASIC1.32□□□□□ -2.2
CDH13P55290 AL356055.1-201ENST00000602528 446 ntBASIC1.32□□□□□ -2.2
CDH13P55290 GHRLOS.1-201ENST00000610995 70 ntBASIC1.32□□□□□ -2.2
CDH13P55290 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
CDH13P55290 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
CDH13P55290 MIR8065-201ENST00000620577 100 ntBASIC1.32□□□□□ -2.2
CDH13P55290 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
CDH13P55290 RNU6-1227P-201ENST00000383981 107 ntBASIC1.31□□□□□ -2.2
CDH13P55290 RNU6-163P-201ENST00000384396 106 ntBASIC1.31□□□□□ -2.2
CDH13P55290 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
CDH13P55290 MIR522-201ENST00000385071 87 ntBASIC1.31□□□□□ -2.2
CDH13P55290 Y_RNA.581-201ENST00000391017 97 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AL451046.2-201ENST00000403074 277 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
CDH13P55290 AC104332.1-201ENST00000440471 797 ntBASIC1.31□□□□□ -2.2
CDH13P55290 MTND4LP30-201ENST00000454092 297 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
CDH13P55290 HSPE1P25-201ENST00000455484 251 ntBASIC1.31□□□□□ -2.2
CDH13P55290 RNU6-1143P-201ENST00000516125 104 ntBASIC1.31□□□□□ -2.2
CDH13P55290 RNU6-917P-201ENST00000516294 104 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AC024405.2-202ENST00000532731 184 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AC127455.1-201ENST00000565496 145 ntBASIC1.31□□□□□ -2.2
CDH13P55290 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
CDH13P55290 MIR4769-201ENST00000584126 77 ntBASIC1.31□□□□□ -2.2
CDH13P55290 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CDH13P55290 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDH13P55290 RNU4-80P-201ENST00000363200 141 ntBASIC1.3□□□□□ -2.2
CDH13P55290 RNU6-770P-201ENST00000363929 105 ntBASIC1.3□□□□□ -2.2
CDH13P55290 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
CDH13P55290 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
CDH13P55290 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
CDH13P55290 MIR548AY-201ENST00000617669 107 ntBASIC1.3□□□□□ -2.2
CDH13P55290 Y_RNA.216-201ENST00000364205 93 ntBASIC1.29□□□□□ -2.2
CDH13P55290 U8.7-201ENST00000364940 136 ntBASIC1.29□□□□□ -2.2
CDH13P55290 SNORA33.2-201ENST00000365413 134 ntBASIC1.29□□□□□ -2.2
CDH13P55290 Y_RNA.418-201ENST00000384029 102 ntBASIC1.29□□□□□ -2.2
CDH13P55290 Y_RNA.527-201ENST00000384573 102 ntBASIC1.29□□□□□ -2.2
CDH13P55290 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
CDH13P55290 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.29□□□□□ -2.2
CDH13P55290 Y_RNA.602-201ENST00000410535 92 ntBASIC1.29□□□□□ -2.2
CDH13P55290 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
CDH13P55290 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
CDH13P55290 AC114811.1-201ENST00000507207 168 ntBASIC1.29□□□□□ -2.2
CDH13P55290 RNU6-191P-201ENST00000516295 94 ntBASIC1.29□□□□□ -2.2
CDH13P55290 RNU6-922P-201ENST00000516753 99 ntBASIC1.29□□□□□ -2.2
CDH13P55290 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
CDH13P55290 AC131281.1-201ENST00000522984 164 ntBASIC1.29□□□□□ -2.2
CDH13P55290 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.29□□□□□ -2.2
CDH13P55290 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
CDH13P55290 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDH13P55290 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH13P55290 Y_RNA.203-201ENST00000364106 102 ntBASIC1.28□□□□□ -2.2
CDH13P55290 Y_RNA.214-201ENST00000364201 112 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-969P-201ENST00000383900 105 ntBASIC1.28□□□□□ -2.2
CDH13P55290 SNORA72.4-201ENST00000384174 132 ntBASIC1.28□□□□□ -2.2
CDH13P55290 RNU6-102P-201ENST00000384485 104 ntBASIC1.28□□□□□ -2.2
CDH13P55290 Y_RNA.569-201ENST00000384749 103 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms